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BaseInfo

ncRNA ID	gma-miR9723
Species	Glycine max
Class	miRNA
Genome position	chr13:14782670-14782843 [-]
Reference genome	v1.0
Source	miRBase
Length	21
Mature sequence(if miRNA)	134 - CAAAGGAGAUUUGGACAACUC - 154
Stem-loop(if miRNA)	C                 A       A            C   U   C  AUUUAACA     CC   -    UUUUAAUCU GGAAUUCC UGGCAAAUUCCCAAAGG GAUUUGG CAACUCAUUUUU CAA AAA GC        UCUAA  ACC CAAA         U |||||||| ||||||||||||||||| ||||||| |||||||||||| ||| ||| ||        |||||  ||| |||| CCUUAAGG ACCGUUUAAGGGUUUCC CUAAACC GUUGAGUAAAAA GUU UUU CG        AGAUU  UGG GUUU         A         A                 C       A            A   U   A  -------G     CA   A    UUAUCCUAA
Stem-loop sequence	GGAAUUCCCUGGCAAAUUCCCAAAGGAGAUUUGGACAACUCAUUUUUCCAAUAAACGCAUUUAACAUCUAACCACCCAAAUUUUAAUCUUAAAUCCUAUUUUUGAGGUACUUAGAGGCAUUUUUUGAAAAAAUGAGUUGACCAAAUCCCCUUUGGGAAUUUGCCAAGGAAUUCC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_006575610.2	ncRNA:21   CAAAGUAAGGAAGGGAAGUUU   1   *|||||*|||||||||||||= targets:176   CUUUCACUCCUUCCCUUCAAG   196 Target Full Sequence	2.0	PREDICTED: Glycine max putative F-box/LRR-repeat protein At1g56400 (LOC102659419), mRNA	putative F-box/LRR-repeat protein At1g56400(LOC102659419)	coding protein	psRNATarget
XM_006588574.2	ncRNA:21   CAAAGUAAGGAAGGGAAGUUU   1   **||=|||||*|||||||||| targets:236   ACUUUAUUCCCUCCCUUCAAA   256 Target Full Sequence	2.5	PREDICTED: Glycine max type I inositol polyphosphate 5-phosphatase 4 (LOC100797409), transcript variant X1, mRNA	type I inositol polyphosphate 5-phosphatase 4(LOC100797409)	coding protein	psRNATarget
XM_003536601.3	ncRNA:21   CAAAGUAAGGAAGGGAAGUUU   1   **||=|||||*|||||||||| targets:236   ACUUUAUUCCCUCCCUUCAAA   256 Target Full Sequence	2.5	PREDICTED: Glycine max type I inositol polyphosphate 5-phosphatase 4 (LOC100797409), transcript variant X2, mRNA	type I inositol polyphosphate 5-phosphatase 4(LOC100797409)	coding protein	psRNATarget
XM_014766432.1	ncRNA:21   CAAAGUAAGGAAGGGAAGUUU   1   **||||||||||||*|||||* targets:258   UCUUCAUUCCUUCCAUUCAAU   278 Target Full Sequence	2.5	PREDICTED: Glycine max uncharacterized LOC100788859 (LOC100788859), mRNA	uncharacterized LOC100788859(LOC100788859)	coding protein	psRNATarget

Reference

1	PMID:24475082 "Systems and evolutionary characterization of microRNAs and their underlying regulatory networks in soybean cotyledons"; Goettel W, Liu Z, Xia J, Zhang W, Zhao PX, An YQ; PLoS One. 9:e86153(2014).