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BaseInfo

ncRNA ID gma-miR9724
Species Glycine max
Class miRNA
Genome position chr13:11864778-11864916 [+]
Reference genome v1.0
Source miRBase
Length 22
Mature sequence(if miRNA) 14 - UAGAGAUAGUGUCAAAAUAGAA - 35
Stem-loop(if miRNA)   CU                        A                AAA          A    -AAA  C
GU  UACAUCGGUUAGAGAUAGUGUCAA AUAGAAUAUAUAAGUG   GACAAUCCUC CCUC    AG U
||  |||||||||||||||||||||||| ||||||||||||||||   |||||||||| ||||    ||
CA  AUGUAGCCAAUCUCUAUCACGGUU UAUCUUAUAUAUUCAC   CUGUUGGGAG GGGG    UC A
  AG                        C                -CC          -    AUAC  G
Stem-loop sequence GUCUUACAUCGGUUAGAGAUAGUGUCAAAAUAGAAUAUAUAAGUGAAAGACAAUCCUCACCUCAAAAGCUAGCUCAUAGGGGGAGGGUUGUCCCCACUUAUAUAUUCUAUCUUGGCACUAUCUCUAACCGAUGUAGAAC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_014776737.1
ncRNA:22   AAGAUAAAACUGUGAUAGAGAU   1
  ||=|||*||||||||=||||||
targets:777   UUUUAUCUUGACACUGUCUCUA   798

2.5 PREDICTED: Glycine max S-locus-specific glycoprotein BS29-2-like (LOC106798962), mRNA S-locus-specific glycoprotein BS29-2-like(LOC106798962) coding protein psRNATarget

Reference

1 PMID:24475082
"Systems and evolutionary characterization of microRNAs and their underlying regulatory networks in soybean cotyledons";
Goettel W, Liu Z, Xia J, Zhang W, Zhao PX, An YQ;
PLoS One. 9:e86153(2014).