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BaseInfo

ncRNA ID ath-miR5658
Species Arabidopsis thaliana
Class miRNA
Genome position chr4:18485438-18485531 [-]
Reference genome TAIR10
Source miRBase
Length 21
Mature sequence(if miRNA) 72 - AUGAUGAUGAUGAUGAUGAAA - 92
Stem-loop(if miRNA) AGAUGA  A               AGAA  AGUAAGAAGCUUCUUC
      UG UGAUGAUGAUGAAAC    UC                U
      || |||||||||||||||    ||
      AC ACUACUACUACUUUG    GA                U
AAGUUG  C               GUUA  AGGAGGAGGAGGAUUC
Stem-loop sequence AGAUGAUGAUGAUGAUGAUGAAACAGAAUCAGUAAGAAGCUUCUUCUUCUUAGGAGGAGGAGGAAGAUUGGUUUCAUCAUCAUCACCAGUUGAA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
NM_001035811.2
ncRNA:21   AAAGUAGUAGUAGUAGUAGUA   1
  |||||||||||||||||||||
targets:3555   UUUCAUCAUCAUCAUCAUCAU   3575

0.0 Arabidopsis thaliana ARM repeat superfamily protein mRNA ARM repeat superfamily protein(AT3G59020) coding protein psRNATarget
NM_115764.3
ncRNA:21   AAAGUAGUAGUAGUAGUAGUA   1
  |||||||||||||||||||||
targets:3408   UUUCAUCAUCAUCAUCAUCAU   3428

0.0 Arabidopsis thaliana ARM repeat superfamily protein mRNA ARM repeat superfamily protein(AT3G59020) coding protein psRNATarget
AK316774.1
ncRNA:21   AAAGUAGUAGUAGUAGUAGUA   1
  |||||||||||||||||||||
targets:3394   UUUCAUCAUCAUCAUCAUCAU   3414

0.0 Arabidopsis thaliana AT3G59020 mRNA, complete cds, clone: RAFL07-87-B04 NA coding protein psRNATarget
NM_120147.3
ncRNA:21   AAAGUAGUAGUAGUAGUAGUA   1
  |||||||||||||||||||||
targets:609   UUUCAUCAUCAUCAUCAUCAU   629

0.0 Arabidopsis thaliana cell wall integrity/stress response component-like protein mRNA cell wall integrity/stress response component-like protein(AT4G39840) coding protein psRNATarget
AY072109.1
ncRNA:21   AAAGUAGUAGUAGUAGUAGUA   1
  |||||||||||||||||||||
targets:352   UUUCAUCAUCAUCAUCAUCAU   372

0.0 Arabidopsis thaliana unknown protein (At4g39840) mRNA, complete cds NA coding protein psRNATarget
BX827272.1
ncRNA:21   AAAGUAGUAGUAGUAGUAGUA   1
  |||||||||||||||||||||
targets:330   UUUCAUCAUCAUCAUCAUCAU   350

0.0 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS30ZF11 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) NA coding protein psRNATarget
AY133834.1
ncRNA:21   AAAGUAGUAGUAGUAGUAGUA   1
  |||||||||||||||||||||
targets:242   UUUCAUCAUCAUCAUCAUCAU   262

0.0 Arabidopsis thaliana clone U19827 unknown protein (At4g39840) mRNA, complete cds NA coding protein psRNATarget
NM_127725.5
ncRNA:21   AAAGUAGUAGUAGUAGUAGUA   1
  |||||||||||||||||||||
targets:161   UUUCAUCAUCAUCAUCAUCAU   181

0.0 Arabidopsis thaliana SMAD/FHA domain-containing protein mRNA SMAD/FHA domain-containing protein(AT2G21530) coding protein psRNATarget
AK118718.1
ncRNA:21   AAAGUAGUAGUAGUAGUAGUA   1
  |||||||||||||||||||||
targets:89   UUUCAUCAUCAUCAUCAUCAU   109

0.0 Arabidopsis thaliana At2g21530 mRNA for unknown protein, complete cds, clone: RAFL21-02-N22 NA coding protein psRNATarget
BX822012.1
ncRNA:21   AAAGUAGUAGUAGUAGUAGUA   1
  |||||||||||||||||||||
targets:2   UUUCAUCAUCAUCAUCAUCAU   22

0.0 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL92ZA08 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) NA coding protein psRNATarget
BX820427.1
ncRNA:21   AAAGUAGUAGUAGUAGUAGUA   1
  |||||||||||||||||||||
targets:523   UUUCAUCAUCAUCAUCAUCAU   543

0.0 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH30ZH12 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) NA coding protein psRNATarget
BT024599.1
ncRNA:21   AAAGUAGUAGUAGUAGUAGUA   1
  |||||||||||||||||||||
targets:41   UUUCAUCAUCAUCAUCAUCAU   61

0.0 Arabidopsis thaliana At2g21530 mRNA, complete cds NA coding protein psRNATarget
NM_123748.3
ncRNA:21   AAAGUAGUAGUAGUAGUAGUA   1
  *||||||||||||||||||||
targets:154   CUUCAUCAUCAUCAUCAUCAU   174

0.0 Arabidopsis thaliana Stabilizer of iron transporter SufD / Polynucleotidyl transferase (AGO10), mRNA Stabilizer of iron transporter SufD / Polynucleotidyl transferase(AGO10) coding protein psRNATarget
NM_001338622.1
ncRNA:21   AAAGUAGUAGUAGUAGUAGUA   1
  *||||||||||||||||||||
targets:3259   AUUCAUCAUCAUCAUCAUCAU   3279

0.0 Arabidopsis thaliana Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain-containing protein mRNA Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain-containing protein(AT3G23270) coding protein psRNATarget
NM_113228.2
ncRNA:21   AAAGUAGUAGUAGUAGUAGUA   1
  *||||||||||||||||||||
targets:3202   AUUCAUCAUCAUCAUCAUCAU   3222

0.0 Arabidopsis thaliana Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain-containing protein partial mRNA Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain-containing protein(AT3G23270) coding protein psRNATarget
NM_001341960.1
ncRNA:21   AAAGUAGUAGUAGUAGUAGUA   1
  *||||||||||||||||||||
targets:1947   CUUCAUCAUCAUCAUCAUCAU   1967

0.0 Arabidopsis thaliana root hair specific 16 (RHS16), mRNA root hair specific 16(RHS16) coding protein psRNATarget
NM_001203936.2
ncRNA:21   AAAGUAGUAGUAGUAGUAGUA   1
  *||||||||||||||||||||
targets:1983   CUUCAUCAUCAUCAUCAUCAU   2003

0.0 Arabidopsis thaliana root hair specific 16 (RHS16), mRNA root hair specific 16(RHS16) coding protein psRNATarget
NM_119062.3
ncRNA:21   AAAGUAGUAGUAGUAGUAGUA   1
  *||||||||||||||||||||
targets:1855   CUUCAUCAUCAUCAUCAUCAU   1875

0.0 Arabidopsis thaliana root hair specific 16 (RHS16), mRNA root hair specific 16(RHS16) coding protein psRNATarget
NM_120412.3
ncRNA:21   AAAGUAGUAGUAGUAGUAGUA   1
  *||||||||||||||||||||
targets:66   AUUCAUCAUCAUCAUCAUCAU   86

0.0 Arabidopsis thaliana ATPase, AAA-type, CDC48 protein (AtCDC48C), mRNA ATPase, AAA-type, CDC48 protein(AtCDC48C) coding protein psRNATarget
NM_124213.5
ncRNA:21   AAAGUAGUAGUAGUAGUAGUA   1
  *||||||||||||||||||||
targets:237   CUUCAUCAUCAUCAUCAUCAU   257

0.0 Arabidopsis thaliana BAK1-interacting receptor-like kinase 1 (BIR1), mRNA BAK1-interacting receptor-like kinase 1(BIR1) coding protein psRNATarget
FJ708757.1
ncRNA:21   AAAGUAGUAGUAGUAGUAGUA   1
  *||||||||||||||||||||
targets:1823   CUUCAUCAUCAUCAUCAUCAU   1843

0.0 Arabidopsis thaliana leucine-rich repeat receptor-like protein kinase (LRR-RLK) mRNA, partial cds NA coding protein psRNATarget
AK118571.1
ncRNA:21   AAAGUAGUAGUAGUAGUAGUA   1
  *||||||||||||||||||||
targets:1   AUUCAUCAUCAUCAUCAUCAU   21

0.0 Arabidopsis thaliana At5g03340 mRNA for putative transitional endoplasmic reticulum ATPase, complete cds, clone: RAFL19-80-L03 NA coding protein psRNATarget
BX831030.1
ncRNA:21   AAAGUAGUAGUAGUAGUAGUA   1
  *||||||||||||||||||||
targets:99   CUUCAUCAUCAUCAUCAUCAU   119

0.0 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS51ZA06 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) NA coding protein psRNATarget
NM_104042.2
ncRNA:21   AAAGUAGUAGUAGUAGUAGUA   1
  *||||||||||||||||||||
targets:1570   CUUCAUCAUCAUCAUCAUCAU   1590

0.0 Arabidopsis thaliana exocyst subunit exo70 family protein G2 (EXO70G2), mRNA exocyst subunit exo70 family protein G2(EXO70G2) coding protein psRNATarget
BX816066.1
ncRNA:21   AAAGUAGUAGUAGUAGUAGUA   1
  *||||||||||||||||||||
targets:1568   CUUCAUCAUCAUCAUCAUCAU   1588

0.0 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH26ZA09 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) NA coding protein psRNATarget
NM_102969.4
ncRNA:21   AAAGUAGUAGUAGUAGUAGUA   1
  *||||||||||||||||||||
targets:298   CUUCAUCAUCAUCAUCAUCAU   318

0.0 Arabidopsis thaliana Zinc finger (CCCH-type) family protein mRNA Zinc finger (CCCH-type) family protein(AT1G32360) coding protein psRNATarget
NM_117781.4
ncRNA:21   AAAGUAGUAGUAGUAGUAGUA   1
  *||||||||||||||||||||
targets:806   CUUCAUCAUCAUCAUCAUCAU   826

0.0 Arabidopsis thaliana hydroxyproline-rich glycoprotein family protein mRNA hydroxyproline-rich glycoprotein family protein(AT4G16790) coding protein psRNATarget
NM_125069.3
ncRNA:21   AAAGUAGUAGUAGUAGUAGUA   1
  *||||||||||||||||||||
targets:273   CUUCAUCAUCAUCAUCAUCAU   293

0.0 Arabidopsis thaliana GATA type zinc finger transcription factor family protein (GNC), mRNA GATA type zinc finger transcription factor family protein(GNC) coding protein psRNATarget
NM_129203.3
ncRNA:21   AAAGUAGUAGUAGUAGUAGUA   1
  *||||||||||||||||||||
targets:298   CUUCAUCAUCAUCAUCAUCAU   318

0.0 Arabidopsis thaliana Aldolase superfamily protein (FBA6), mRNA Aldolase superfamily protein(FBA6) coding protein psRNATarget
NM_001336598.1
ncRNA:21   AAAGUAGUAGUAGUAGUAGUA   1
  *||||||||||||||||||||
targets:58   CUUCAUCAUCAUCAUCAUCAU   78

0.0 Arabidopsis thaliana Aldolase superfamily protein (FBA6), mRNA Aldolase superfamily protein(FBA6) coding protein psRNATarget
AY056407.1
ncRNA:21   AAAGUAGUAGUAGUAGUAGUA   1
  *||||||||||||||||||||
targets:90   CUUCAUCAUCAUCAUCAUCAU   110

0.0 Arabidopsis thaliana At1g32359/F27G20.10 mRNA, complete cds NA coding protein psRNATarget
AY088953.1
ncRNA:21   AAAGUAGUAGUAGUAGUAGUA   1
  *||||||||||||||||||||
targets:210   CUUCAUCAUCAUCAUCAUCAU   230

0.0 Arabidopsis thaliana clone 110454 mRNA, complete sequence NA coding protein psRNATarget
BX816731.1
ncRNA:21   AAAGUAGUAGUAGUAGUAGUA   1
  *||||||||||||||||||||
targets:133   CUUCAUCAUCAUCAUCAUCAU   153

0.0 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH66ZA08 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) NA coding protein psRNATarget
AK226346.1
ncRNA:21   AAAGUAGUAGUAGUAGUAGUA   1
  *||||||||||||||||||||
targets:713   CUUCAUCAUCAUCAUCAUCAU   733

0.0 Arabidopsis thaliana mRNA for glycoprotein homolog, complete cds, clone: RAFL05-15-L15 NA coding protein psRNATarget
AY065074.1
ncRNA:21   AAAGUAGUAGUAGUAGUAGUA   1
  *||||||||||||||||||||
targets:159   CUUCAUCAUCAUCAUCAUCAU   179

0.0 Arabidopsis thaliana unknown protein (At5g56860; MPI10.2) mRNA, complete cds NA coding protein psRNATarget
AY072022.1
ncRNA:21   AAAGUAGUAGUAGUAGUAGUA   1
  *||||||||||||||||||||
targets:719   CUUCAUCAUCAUCAUCAUCAU   739

0.0 Arabidopsis thaliana AT4g16790/dl4420c mRNA, complete cds NA coding protein psRNATarget
BX816945.1
ncRNA:21   AAAGUAGUAGUAGUAGUAGUA   1
  *||||||||||||||||||||
targets:58   CUUCAUCAUCAUCAUCAUCAU   78

0.0 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH78ZB02 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) NA coding protein psRNATarget
AY086520.1
ncRNA:21   AAAGUAGUAGUAGUAGUAGUA   1
  *||||||||||||||||||||
targets:724   CUUCAUCAUCAUCAUCAUCAU   744

0.0 Arabidopsis thaliana clone 255542 mRNA, complete sequence NA coding protein psRNATarget
BX826763.1
ncRNA:21   AAAGUAGUAGUAGUAGUAGUA   1
  *||||||||||||||||||||
targets:759   CUUCAUCAUCAUCAUCAUCAU   779

0.0 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB61ZC10 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) NA coding protein psRNATarget
BX828084.1
ncRNA:21   AAAGUAGUAGUAGUAGUAGUA   1
  *||||||||||||||||||||
targets:734   CUUCAUCAUCAUCAUCAUCAU   754

0.0 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH50ZD02 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) NA coding protein psRNATarget
AJ288958.1
ncRNA:21   AAAGUAGUAGUAGUAGUAGUA   1
  *||||||||||||||||||||
targets:669   CUUCAUCAUCAUCAUCAUCAU   689

0.0 Arabidopsis thaliana partial mRNA for hypothetical protein, clone c15.041 NA coding protein psRNATarget
NM_001124981.1
ncRNA:21   AAAGUAGUAGUAGUAGUAGUA   1
  *||||||||||||||||||||
targets:58   CUUCAUCAUCAUCAUCAUCAU   78

0.0 Arabidopsis thaliana Aldolase superfamily protein (FBA6), mRNA Aldolase superfamily protein(FBA6) coding protein psRNATarget
NM_104294.3
ncRNA:21   AAAGUAGUAGUAGUAGUAGUA   1
  *||||||||||||||||||||
targets:174   AUUCAUCAUCAUCAUCAUCAU   194

0.0 Arabidopsis thaliana nuclear factor Y, subunit A5 (NF-YA5), mRNA nuclear factor Y, subunit A5(NF-YA5) coding protein psRNATarget
NM_125544.4
ncRNA:21   AAAGUAGUAGUAGUAGUAGUA   1
  *||||||||||||||||||||
targets:43   CUUCAUCAUCAUCAUCAUCAU   63

0.0 Arabidopsis thaliana GroES-like zinc-binding alcohol dehydrogenase family protein mRNA GroES-like zinc-binding alcohol dehydrogenase family protein(AT5G61510) coding protein psRNATarget
AY149947.1
ncRNA:21   AAAGUAGUAGUAGUAGUAGUA   1
  *||||||||||||||||||||
targets:674   CUUCAUCAUCAUCAUCAUCAU   694

0.0 Arabidopsis thaliana At4g16790/dl4420c mRNA, complete cds NA coding protein psRNATarget
AF386957.1
ncRNA:21   AAAGUAGUAGUAGUAGUAGUA   1
  *||||||||||||||||||||
targets:83   AUUCAUCAUCAUCAUCAUCAU   103

0.0 Arabidopsis thaliana Unknown protein (F15I1.26) mRNA, complete cds NA coding protein psRNATarget
BX829585.1
ncRNA:21   AAAGUAGUAGUAGUAGUAGUA   1
  *||||||||||||||||||||
targets:39   CUUCAUCAUCAUCAUCAUCAU   59

0.0 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB22ZG08 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) NA coding protein psRNATarget
AY087625.1
ncRNA:21   AAAGUAGUAGUAGUAGUAGUA   1
  *||||||||||||||||||||
targets:2   CUUCAUCAUCAUCAUCAUCAU   22

0.0 Arabidopsis thaliana clone 37197 mRNA, complete sequence NA coding protein psRNATarget
NM_129296.4
ncRNA:21   AAAGUAGUAGUAGUAGUAGUA   1
  *||||||||||||||||||||
targets:825   CUUCAUCAUCAUCAUCAUCAU   845

0.0 Arabidopsis thaliana translocase inner membrane subunit 17-2 (TIM17-2), mRNA translocase inner membrane subunit 17-2(TIM17-2) coding protein psRNATarget
NM_001338636.1
ncRNA:21   AAAGUAGUAGUAGUAGUAGUA   1
  *||||||||||||||||||||
targets:946   GUUCAUCAUCAUCAUCAUCAU   966

0.0 Arabidopsis thaliana embryo sac development arrest 6 (EDA6), mRNA embryo sac development arrest 6(EDA6) coding protein psRNATarget
NM_001338636.1
ncRNA:21   AAAGUAGUAGUAGUAGUAGUA   1
  **|||||||||||||||||||
targets:967   CAUCAUCAUCAUCAUCAUCAU   987

0.0 Arabidopsis thaliana embryo sac development arrest 6 (EDA6), mRNA embryo sac development arrest 6(EDA6) coding protein psRNATarget
BT029771.1
ncRNA:21   AAAGUAGUAGUAGUAGUAGUA   1
  *||||||||||||||||||||
targets:16   CUUCAUCAUCAUCAUCAUCAU   36

0.0 Arabidopsis thaliana At5g61510 mRNA, complete cds NA coding protein psRNATarget
BT025970.1
ncRNA:21   AAAGUAGUAGUAGUAGUAGUA   1
  *||||||||||||||||||||
targets:94   CUUCAUCAUCAUCAUCAUCAU   114

0.0 Arabidopsis thaliana At5g56860 mRNA, complete cds NA coding protein psRNATarget
AF360258.1
ncRNA:21   AAAGUAGUAGUAGUAGUAGUA   1
  *||||||||||||||||||||
targets:725   CUUCAUCAUCAUCAUCAUCAU   745

0.0 Arabidopsis thaliana putative protein translocase (At2g37410) mRNA, complete cds NA coding protein psRNATarget
AF186847.1
ncRNA:21   AAAGUAGUAGUAGUAGUAGUA   1
  *||||||||||||||||||||
targets:711   CUUCAUCAUCAUCAUCAUCAU   731

0.0 Arabidopsis thaliana TIM17 (TIM17) mRNA, complete cds NA coding protein psRNATarget
AY056107.1
ncRNA:21   AAAGUAGUAGUAGUAGUAGUA   1
  *||||||||||||||||||||
targets:700   CUUCAUCAUCAUCAUCAUCAU   720

0.0 Arabidopsis thaliana At2g37410/F3G5.20 mRNA, complete cds NA coding protein psRNATarget
BX819640.1
ncRNA:21   AAAGUAGUAGUAGUAGUAGUA   1
  *||||||||||||||||||||
targets:707   CUUCAUCAUCAUCAUCAUCAU   727

0.0 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS10ZB08 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) NA coding protein psRNATarget
BX820324.1
ncRNA:21   AAAGUAGUAGUAGUAGUAGUA   1
  *||||||||||||||||||||
targets:678   CUUCAUCAUCAUCAUCAUCAU   698

0.0 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH22ZG07 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) NA coding protein psRNATarget
NM_201892.1
ncRNA:21   AAAGUAGUAGUAGUAGUAGUA   1
  *||||||||||||||||||||
targets:701   CUUCAUCAUCAUCAUCAUCAU   721

0.0 Arabidopsis thaliana translocase inner membrane subunit 17-2 (TIM17-2), mRNA translocase inner membrane subunit 17-2(TIM17-2) coding protein psRNATarget
BX819970.1
ncRNA:21   AAAGUAGUAGUAGUAGUAGUA   1
  *||||||||||||||||||||
targets:692   CUUCAUCAUCAUCAUCAUCAU   712

0.0 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS55ZD01 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) NA coding protein psRNATarget
BX819783.1
ncRNA:21   AAAGUAGUAGUAGUAGUAGUA   1
  *||||||||||||||||||||
targets:657   CUUCAUCAUCAUCAUCAUCAU   677

0.0 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS27ZA01 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) NA coding protein psRNATarget
BX820963.1
ncRNA:21   AAAGUAGUAGUAGUAGUAGUA   1
  *||||||||||||||||||||
targets:630   CUUCAUCAUCAUCAUCAUCAU   650

0.0 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH86ZD06 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) NA coding protein psRNATarget
BT020488.1
ncRNA:21   AAAGUAGUAGUAGUAGUAGUA   1
  *||||||||||||||||||||
targets:140   CUUCAUCAUCAUCAUCAUCAU   160

0.0 Arabidopsis thaliana At5g56860 gene, complete cds NA coding protein psRNATarget
NM_102694.3
ncRNA:21   AAAGUAGUAGUAGUAGUAGUA   1
  *||||||||||||||||||||
targets:224   CUUCAUCAUCAUCAUCAUCAU   244

0.0 Arabidopsis thaliana LOW protein: protein BOBBER-like protein mRNA LOW protein: protein BOBBER-like protein(AT1G29540) coding protein psRNATarget
AY040072.1
ncRNA:21   AAAGUAGUAGUAGUAGUAGUA   1
  *||||||||||||||||||||
targets:593   CUUCAUCAUCAUCAUCAUCAU   613

0.0 Arabidopsis thaliana putative protein translocase (At2g37410) mRNA, complete cds NA coding protein psRNATarget
BX818769.1
ncRNA:21   AAAGUAGUAGUAGUAGUAGUA   1
  *||||||||||||||||||||
targets:362   CUUCAUCAUCAUCAUCAUCAU   382

0.0 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB11ZA07 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) NA coding protein psRNATarget
AY463970.1
ncRNA:21   AAAGUAGUAGUAGUAGUAGUA   1
  *||||||||||||||||||||
targets:593   CUUCAUCAUCAUCAUCAUCAU   613

0.0 Arabidopsis thaliana mitochondrial inner membrane translocase TM17-2 (At2g37410) mRNA, partial cds; nuclear gene for mitochondrial product NA coding protein psRNATarget
BX819072.1
ncRNA:21   AAAGUAGUAGUAGUAGUAGUA   1
  *||||||||||||||||||||
targets:256   CUUCAUCAUCAUCAUCAUCAU   276

0.0 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB42ZF09 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) NA coding protein psRNATarget
NM_128830.4
ncRNA:21   AAAGUAGUAGUAGUAGUAGUA   1
  |*|||||||||||||||||||
targets:1839   UAUCAUCAUCAUCAUCAUCAU   1859

0.0 Arabidopsis thaliana Cyclin-dependent kinase inhibitor family protein mRNA Cyclin-dependent kinase inhibitor family protein(AT2G32710) coding protein psRNATarget
NM_106030.2
ncRNA:21   AAAGUAGUAGUAGUAGUAGUA   1
  **|||||||||||||||||||
targets:49   CAUCAUCAUCAUCAUCAUCAU   69

0.0 Arabidopsis thaliana Pentatricopeptide repeat (PPR) superfamily protein partial mRNA Pentatricopeptide repeat (PPR) superfamily protein(AT1G73710) coding protein psRNATarget
NM_101439.5
ncRNA:21   AAAGUAGUAGUAGUAGUAGUA   1
  |*|||||||||||||||||||
targets:1415   UAUCAUCAUCAUCAUCAUCAU   1435

0.0 Arabidopsis thaliana prephenate dehydrogenase family protein mRNA prephenate dehydrogenase family protein(AT1G15710) coding protein psRNATarget
NM_001343565.1
ncRNA:21   AAAGUAGUAGUAGUAGUAGUA   1
  |||||||=|||||||||||||
targets:144   UUUCAUCGUCAUCAUCAUCAU   164

1.0 Arabidopsis thaliana transmembrane protein partial mRNA transmembrane protein(AT5G18735) coding protein psRNATarget
NM_106009.3
ncRNA:21   AAAGUAGUAGUAGUAGUAGUA   1
  ||||||||||||||||||||*
targets:247   UUUCAUCAUCAUCAUCAUCAC   267

1.0 Arabidopsis thaliana MAP kinase kinase 9 (MKK9), mRNA MAP kinase kinase 9(MKK9) coding protein psRNATarget
AY084571.1
ncRNA:21   AAAGUAGUAGUAGUAGUAGUA   1
  ||||||||||||||||||||*
targets:133   UUUCAUCAUCAUCAUCAUCAC   153

1.0 Arabidopsis thaliana clone 112118 mRNA, complete sequence NA coding protein psRNATarget
NM_122425.3
ncRNA:21   AAAGUAGUAGUAGUAGUAGUA   1
  ||||||||||||||||||||*
targets:844   UUUCAUCAUCAUCAUCAUCAG   864

1.0 Arabidopsis thaliana zinc finger protein 3 (ZFP3), mRNA zinc finger protein 3(ZFP3) coding protein psRNATarget
AK227706.1
ncRNA:21   AAAGUAGUAGUAGUAGUAGUA   1
  ||||||||||||||||||||*
targets:575   UUUCAUCAUCAUCAUCAUCAG   595

1.0 Arabidopsis thaliana mRNA for ZFP3 zinc finger protein, complete cds, clone: RAFL14-29-I08 NA coding protein psRNATarget
L39646.1
ncRNA:21   AAAGUAGUAGUAGUAGUAGUA   1
  ||||||||||||||||||||*
targets:562   UUUCAUCAUCAUCAUCAUCAG   582

1.0 Arabidopsis thaliana zinc finger protein (ZFP3) mRNA, complete cds NA coding protein psRNATarget
NM_001342426.1
ncRNA:21   AAAGUAGUAGUAGUAGUAGUA   1
  **||||||||||||||||||*
targets:878   GAUCAUCAUCAUCAUCAUCAC   898

1.0 Arabidopsis thaliana BEL1-like homeodomain 2 (BLH2), mRNA BEL1-like homeodomain 2(BLH2) coding protein psRNATarget
NM_001036720.5
ncRNA:21   AAAGUAGUAGUAGUAGUAGUA   1
  **||||||||||||||||||*
targets:959   GAUCAUCAUCAUCAUCAUCAC   979

1.0 Arabidopsis thaliana BEL1-like homeodomain 2 (BLH2), mRNA BEL1-like homeodomain 2(BLH2) coding protein psRNATarget
NM_119851.6
ncRNA:21   AAAGUAGUAGUAGUAGUAGUA   1
  **||||||||||||||||||*
targets:862   GAUCAUCAUCAUCAUCAUCAC   882

1.0 Arabidopsis thaliana BEL1-like homeodomain 2 (BLH2), mRNA BEL1-like homeodomain 2(BLH2) coding protein psRNATarget
BT008308.1
ncRNA:21   AAAGUAGUAGUAGUAGUAGUA   1
  ||||||||||||||||||||*
targets:508   UUUCAUCAUCAUCAUCAUCAG   528

1.0 Arabidopsis thaliana At5g25160 gene, complete cds NA coding protein psRNATarget
AF173816.1
ncRNA:21   AAAGUAGUAGUAGUAGUAGUA   1
  **||||||||||||||||||*
targets:736   GAUCAUCAUCAUCAUCAUCAC   756

1.0 Arabidopsis thaliana bel1-like homeodomain 2 (BLH2) mRNA, complete cds NA coding protein psRNATarget
AY050459.2
ncRNA:21   AAAGUAGUAGUAGUAGUAGUA   1
  **||||||||||||||||||*
targets:696   GAUCAUCAUCAUCAUCAUCAC   716

1.0 Arabidopsis thaliana AT4g36870/C7A10_490 mRNA, complete cds NA coding protein psRNATarget
NM_001342427.1
ncRNA:21   AAAGUAGUAGUAGUAGUAGUA   1
  **||||||||||||||||||*
targets:737   GAUCAUCAUCAUCAUCAUCAC   757

1.0 Arabidopsis thaliana BEL1-like homeodomain 2 (BLH2), mRNA BEL1-like homeodomain 2(BLH2) coding protein psRNATarget
NM_115866.4
ncRNA:21   AAAGUAGUAGUAGUAGUAGUA   1
  |||*|||||||||||||||||
targets:206   UUUAAUCAUCAUCAUCAUCAU   226

1.0 Arabidopsis thaliana squamosa promoter-binding protein-like 12 (SPL12), mRNA squamosa promoter-binding protein-like 12(SPL12) coding protein psRNATarget
AY091024.1
ncRNA:21   AAAGUAGUAGUAGUAGUAGUA   1
  |||*|||||||||||||||||
targets:90   UUUAAUCAUCAUCAUCAUCAU   110

1.0 Arabidopsis thaliana At3g60030 mRNA sequence NA coding protein psRNATarget
NM_102774.2
ncRNA:21   AAAGUAGUAGUAGUAGUAGUA   1
  *||=|||||||||||||||||
targets:31   CUUUAUCAUCAUCAUCAUCAU   51

1.0 Arabidopsis thaliana alpha/beta-Hydrolases superfamily protein (DLAH), mRNA alpha/beta-Hydrolases superfamily protein(DLAH) coding protein psRNATarget
NM_129528.3
ncRNA:21   AAAGUAGUAGUAGUAGUAGUA   1
  *|||=||||||||||||||||
targets:70   AUUCGUCAUCAUCAUCAUCAU   90

1.0 Arabidopsis thaliana Eukaryotic aspartyl protease family protein mRNA Eukaryotic aspartyl protease family protein(AT2G39710) coding protein psRNATarget
AF370142.1
ncRNA:21   AAAGUAGUAGUAGUAGUAGUA   1
  *|||=||||||||||||||||
targets:9   AUUCGUCAUCAUCAUCAUCAU   29

1.0 Arabidopsis thaliana unknown protein (At2g39710) mRNA, complete cds NA coding protein psRNATarget
AK118359.1
ncRNA:21   AAAGUAGUAGUAGUAGUAGUA   1
  *|||=||||||||||||||||
targets:9   AUUCGUCAUCAUCAUCAUCAU   29

1.0 Arabidopsis thaliana At2g39710 mRNA for unknown protein, complete cds, clone: RAFL19-62-P06 NA coding protein psRNATarget
BX820083.1
ncRNA:21   AAAGUAGUAGUAGUAGUAGUA   1
  *|||=||||||||||||||||
targets:3   AUUCGUCAUCAUCAUCAUCAU   23

1.0 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS71ZH03 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) NA coding protein psRNATarget
AY051049.1
ncRNA:21   AAAGUAGUAGUAGUAGUAGUA   1
  *|||=||||||||||||||||
targets:8   AUUCGUCAUCAUCAUCAUCAU   28

1.0 Arabidopsis thaliana unknown protein (At2g39710) mRNA, complete cds NA coding protein psRNATarget
AF370304.1
ncRNA:21   AAAGUAGUAGUAGUAGUAGUA   1
  *||=|||||||||||||||||
targets:249   CUUUAUCAUCAUCAUCAUCAU   269

1.0 Arabidopsis thaliana unknown protein (At1g79510) mRNA, complete cds NA coding protein psRNATarget
NM_106599.2
ncRNA:21   AAAGUAGUAGUAGUAGUAGUA   1
  *||=|||||||||||||||||
targets:243   CUUUAUCAUCAUCAUCAUCAU   263

1.0 Arabidopsis thaliana hypothetical protein (DUF2358) mRNA hypothetical protein (DUF2358)(AT1G79510) coding protein psRNATarget
NM_202448.1
ncRNA:21   AAAGUAGUAGUAGUAGUAGUA   1
  *||=|||||||||||||||||
targets:135   CUUUAUCAUCAUCAUCAUCAU   155

1.0 Arabidopsis thaliana hypothetical protein (DUF2358) mRNA hypothetical protein (DUF2358)(AT1G79510) coding protein psRNATarget
AY086169.1
ncRNA:21   AAAGUAGUAGUAGUAGUAGUA   1
  *||=|||||||||||||||||
targets:193   CUUUAUCAUCAUCAUCAUCAU   213

1.0 Arabidopsis thaliana clone 21947 mRNA, complete sequence NA coding protein psRNATarget
BX813957.1
ncRNA:21   AAAGUAGUAGUAGUAGUAGUA   1
  *||=|||||||||||||||||
targets:194   CUUUAUCAUCAUCAUCAUCAU   214

1.0 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB4ZB02 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) NA coding protein psRNATarget
AY035001.1
ncRNA:21   AAAGUAGUAGUAGUAGUAGUA   1
  ||||*||||||||||||||||
targets:116   UUUCUUCAUCAUCAUCAUCAU   136

1.0 Arabidopsis thaliana putative scarecrow 11 protein (At5g59450) mRNA, complete cds NA coding protein psRNATarget
NM_125336.2
ncRNA:21   AAAGUAGUAGUAGUAGUAGUA   1
  ||||*||||||||||||||||
targets:116   UUUCUUCAUCAUCAUCAUCAU   136

1.0 Arabidopsis thaliana GRAS family transcription factor mRNA GRAS family transcription factor(AT5G59450) coding protein psRNATarget
BX841771.1
ncRNA:21   AAAGUAGUAGUAGUAGUAGUA   1
  *||=|||||||||||||||||
targets:163   CUUUAUCAUCAUCAUCAUCAU   183

1.0 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB25ZF12 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) NA coding protein psRNATarget
BX830411.1
ncRNA:21   AAAGUAGUAGUAGUAGUAGUA   1
  ||||*||||||||||||||||
targets:108   UUUCUUCAUCAUCAUCAUCAU   128

1.0 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB79ZF02 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) NA coding protein psRNATarget
BX831740.1
ncRNA:21   AAAGUAGUAGUAGUAGUAGUA   1
  ||||*||||||||||||||||
targets:96   UUUCUUCAUCAUCAUCAUCAU   116

1.0 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH27ZD06 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) NA coding protein psRNATarget
NM_118126.4
ncRNA:21   AAAGUAGUAGUAGUAGUAGUA   1
  ||*||||||||||||||||||
targets:239   UUCCAUCAUCAUCAUCAUCAU   259

1.0 Arabidopsis thaliana allantoate amidohydrolase (AAH), mRNA allantoate amidohydrolase(AAH) coding protein psRNATarget
NM_001341398.1
ncRNA:21   AAAGUAGUAGUAGUAGUAGUA   1
  ||*||||||||||||||||||
targets:235   UUCCAUCAUCAUCAUCAUCAU   255

1.0 Arabidopsis thaliana allantoate amidohydrolase (AAH), mRNA allantoate amidohydrolase(AAH) coding protein psRNATarget
NM_117993.3
ncRNA:21   AAAGUAGUAGUAGUAGUAGUA   1
  |||*|||||||||||||||||
targets:204   UUUGAUCAUCAUCAUCAUCAU   224

1.0 Arabidopsis thaliana myb domain protein 98 (MYB98), mRNA myb domain protein 98(MYB98) coding protein psRNATarget
AY099588.1
ncRNA:21   AAAGUAGUAGUAGUAGUAGUA   1
  ||*||||||||||||||||||
targets:166   UUCCAUCAUCAUCAUCAUCAU   186

1.0 Arabidopsis thaliana At4g20070 mRNA sequence NA coding protein psRNATarget
BX828231.1
ncRNA:21   AAAGUAGUAGUAGUAGUAGUA   1
  ||*||||||||||||||||||
targets:146   UUCCAUCAUCAUCAUCAUCAU   166

1.0 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH66ZB01 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) NA coding protein psRNATarget
NM_123427.3
ncRNA:21   AAAGUAGUAGUAGUAGUAGUA   1
  |||||||||=|||||||||||
targets:191   UUUCAUCAUUAUCAUCAUCAU   211

1.5 Arabidopsis thaliana Ubiquitin-like superfamily protein mRNA Ubiquitin-like superfamily protein(AT5G40630) coding protein psRNATarget
AK317452.1
ncRNA:21   AAAGUAGUAGUAGUAGUAGUA   1
  |||||||||=|||||||||||
targets:175   UUUCAUCAUUAUCAUCAUCAU   195

1.5 Arabidopsis thaliana AT5G40630 mRNA, complete cds, clone: RAFL25-37-N20 NA coding protein psRNATarget
AK117320.1
ncRNA:21   AAAGUAGUAGUAGUAGUAGUA   1
  |||||||||=|||||||||||
targets:167   UUUCAUCAUUAUCAUCAUCAU   187

1.5 Arabidopsis thaliana At5g40630 mRNA for unknown protein, complete cds, clone: RAFL16-88-P09 NA coding protein psRNATarget
BT043485.1
ncRNA:21   AAAGUAGUAGUAGUAGUAGUA   1
  |||||||||=|||||||||||
targets:107   UUUCAUCAUUAUCAUCAUCAU   127

1.5 Arabidopsis thaliana unknown protein (At5g40630) mRNA, complete cds NA coding protein psRNATarget
NM_001160821.3
ncRNA:21   AAAGUAGUAGUAGUAGUAGUA   1
  |||||||||||||*|||||||
targets:207   UUUCAUCAUCAUCUUCAUCAU   227

1.5 Arabidopsis thaliana spatacsin carboxy-terminus protein mRNA spatacsin carboxy-terminus protein(AT4G39420) coding protein psRNATarget
NM_001342541.1
ncRNA:21   AAAGUAGUAGUAGUAGUAGUA   1
  |||||||||||||*|||||||
targets:129   UUUCAUCAUCAUCUUCAUCAU   149

1.5 Arabidopsis thaliana spatacsin carboxy-terminus protein mRNA spatacsin carboxy-terminus protein(AT4G39420) coding protein psRNATarget
NM_100428.4
ncRNA:21   AAAGUAGUAGUAGUAGUAGUA   1
  *|||||||||||||||=||||
targets:1062   CUUCAUCAUCAUCAUCGUCAU   1082

1.5 Arabidopsis thaliana chromatin remodeling 31 (chr31), mRNA chromatin remodeling 31(chr31) coding protein psRNATarget
AK226351.1
ncRNA:21   AAAGUAGUAGUAGUAGUAGUA   1
  *|||||||||||||||=||||
targets:1025   CUUCAUCAUCAUCAUCGUCAU   1045

1.5 Arabidopsis thaliana mRNA for hypothetical protein, complete cds, clone: RAFL05-16-H20 NA coding protein psRNATarget
NM_121662.3
ncRNA:21   AAAGUAGUAGUAGUAGUAGUA   1
  **|||||||||||||||*|||
targets:590   AGUCAUCAUCAUCAUCACCAU   610

1.5 Arabidopsis thaliana Homeodomain-like superfamily protein (KAN), mRNA Homeodomain-like superfamily protein(KAN) coding protein psRNATarget
NM_120102.7
ncRNA:21   AAAGUAGUAGUAGUAGUAGUA   1
  |||||||||||||*|||||||
targets:47   UUUCAUCAUCAUCUUCAUCAU   67

1.5 Arabidopsis thaliana spatacsin carboxy-terminus protein mRNA spatacsin carboxy-terminus protein(AT4G39420) coding protein psRNATarget
AY030192.1
ncRNA:21   AAAGUAGUAGUAGUAGUAGUA   1
  **|||||||||||||||*|||
targets:248   AGUCAUCAUCAUCAUCACCAU   268

1.5 Arabidopsis thaliana clone A1-2 KANADI protein (KAN) mRNA, complete cds NA coding protein psRNATarget
NM_001343283.1
ncRNA:21   AAAGUAGUAGUAGUAGUAGUA   1
  *||||||||||||=|||||||
targets:2867   AUUCAUCAUCAUCGUCAUCAU   2887

1.5 Arabidopsis thaliana phospholipid:diacylglycerol acyltransferase (PDAT), mRNA phospholipid:diacylglycerol acyltransferase(PDAT) coding protein psRNATarget
BX830211.1
ncRNA:21   AAAGUAGUAGUAGUAGUAGUA   1
  **|||||||||||||||*|||
targets:191   AGUCAUCAUCAUCAUCACCAU   211

1.5 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB66ZC07 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) NA coding protein psRNATarget
NM_121367.3
ncRNA:21   AAAGUAGUAGUAGUAGUAGUA   1
  *||||||||||||=|||||||
targets:2680   AUUCAUCAUCAUCGUCAUCAU   2700

1.5 Arabidopsis thaliana phospholipid:diacylglycerol acyltransferase (PDAT), mRNA phospholipid:diacylglycerol acyltransferase(PDAT) coding protein psRNATarget
AY160110.1
ncRNA:21   AAAGUAGUAGUAGUAGUAGUA   1
  *||||||||||||=|||||||
targets:2212   AUUCAUCAUCAUCGUCAUCAU   2232

1.5 Arabidopsis thaliana lecithine cholesterol acyltransferase-like protein mRNA, complete cds NA coding protein psRNATarget
AX037581.1
ncRNA:21   AAAGUAGUAGUAGUAGUAGUA   1
  *||||||||||||=|||||||
targets:2208   AUUCAUCAUCAUCGUCAUCAU   2228

1.5 Sequence 5 from Patent WO0060095 NA coding protein psRNATarget
AY052715.1
ncRNA:21   AAAGUAGUAGUAGUAGUAGUA   1
  *||||||||||||=|||||||
targets:2147   AUUCAUCAUCAUCGUCAUCAU   2167

1.5 Arabidopsis thaliana AT5g13640/MSH12_10 mRNA, complete cds NA coding protein psRNATarget
NM_001343284.1
ncRNA:21   AAAGUAGUAGUAGUAGUAGUA   1
  *||||||||||||=|||||||
targets:2076   AUUCAUCAUCAUCGUCAUCAU   2096

1.5 Arabidopsis thaliana phospholipid:diacylglycerol acyltransferase (PDAT), mRNA phospholipid:diacylglycerol acyltransferase(PDAT) coding protein psRNATarget
NM_129839.4
ncRNA:21   AAAGUAGUAGUAGUAGUAGUA   1
  *|||||||||||||||=||||
targets:135   AUUCAUCAUCAUCAUCGUCAU   155

1.5 Arabidopsis thaliana transcription elongation factor B polypeptide mRNA transcription elongation factor B polypeptide(AT2G42780) coding protein psRNATarget
NM_123564.3
ncRNA:21   AAAGUAGUAGUAGUAGUAGUA   1
  |||||||||||||||||||*|
targets:12   UUUCAUCAUCAUCAUCAUCCU   32

1.5 Arabidopsis thaliana with no lysine (K) kinase 8 (WNK8), mRNA with no lysine (K) kinase 8(WNK8) coding protein psRNATarget
AF424629.1
ncRNA:21   AAAGUAGUAGUAGUAGUAGUA   1
  |||||||||||||||||||*|
targets:12   UUUCAUCAUCAUCAUCAUCCU   32

1.5 Arabidopsis thaliana AT5g41990/MJC20_9 mRNA, complete cds NA coding protein psRNATarget
NM_001202807.1
ncRNA:21   AAAGUAGUAGUAGUAGUAGUA   1
  *|||||||||||||||=||||
targets:3   AUUCAUCAUCAUCAUCGUCAU   23

1.5 Arabidopsis thaliana transcription elongation factor B polypeptide mRNA transcription elongation factor B polypeptide(AT2G42780) coding protein psRNATarget
NM_128296.4
ncRNA:21   AAAGUAGUAGUAGUAGUAGUA   1
  *||||||||=|||||||||||
targets:115   CUUCAUCAUUAUCAUCAUCAU   135

1.5 Arabidopsis thaliana Uncharacterized protein family (UPF0497) (CASP3), mRNA Uncharacterized protein family (UPF0497)(CASP3) coding protein psRNATarget
NM_001342426.1
ncRNA:21   AA-AGUAGUAGUAGUAGUAGUA   1
  ||-|||||||||||||||||||
targets:319   UUAUCAUCAUCAUCAUCAUCAU   340

2.0 Arabidopsis thaliana BEL1-like homeodomain 2 (BLH2), mRNA BEL1-like homeodomain 2(BLH2) coding protein psRNATarget
NM_001036720.5
ncRNA:21   AA-AGUAGUAGUAGUAGUAGUA   1
  ||-|||||||||||||||||||
targets:400   UUAUCAUCAUCAUCAUCAUCAU   421

2.0 Arabidopsis thaliana BEL1-like homeodomain 2 (BLH2), mRNA BEL1-like homeodomain 2(BLH2) coding protein psRNATarget
NM_001344854.1
ncRNA:21   AA-AGUAGUAGUAGUAGUAGUA   1
  ||-|||||||||||||||||||
targets:139   UUAUCAUCAUCAUCAUCAUCAU   160

2.0 Arabidopsis thaliana ferric reduction oxidase 7 (FRO7), mRNA ferric reduction oxidase 7(FRO7) coding protein psRNATarget
NM_001344853.1
ncRNA:21   AA-AGUAGUAGUAGUAGUAGUA   1
  ||-|||||||||||||||||||
targets:186   UUAUCAUCAUCAUCAUCAUCAU   207

2.0 Arabidopsis thaliana ferric reduction oxidase 7 (FRO7), mRNA ferric reduction oxidase 7(FRO7) coding protein psRNATarget
NM_119851.6
ncRNA:21   AA-AGUAGUAGUAGUAGUAGUA   1
  ||-|||||||||||||||||||
targets:303   UUAUCAUCAUCAUCAUCAUCAU   324

2.0 Arabidopsis thaliana BEL1-like homeodomain 2 (BLH2), mRNA BEL1-like homeodomain 2(BLH2) coding protein psRNATarget
NM_124352.4
ncRNA:21   AA-AGUAGUAGUAGUAGUAGUA   1
  ||-|||||||||||||||||||
targets:186   UUAUCAUCAUCAUCAUCAUCAU   207

2.0 Arabidopsis thaliana ferric reduction oxidase 7 (FRO7), mRNA ferric reduction oxidase 7(FRO7) coding protein psRNATarget
AF173816.1
ncRNA:21   AA-AGUAGUAGUAGUAGUAGUA   1
  ||-|||||||||||||||||||
targets:177   UUAUCAUCAUCAUCAUCAUCAU   198

2.0 Arabidopsis thaliana bel1-like homeodomain 2 (BLH2) mRNA, complete cds NA coding protein psRNATarget
AK227087.1
ncRNA:21   AA-AGUAGUAGUAGUAGUAGUA   1
  ||-|||||||||||||||||||
targets:80   UUAUCAUCAUCAUCAUCAUCAU   101

2.0 Arabidopsis thaliana mRNA for FRO1-like protein, complete cds, clone: RAFL09-70-G05 NA coding protein psRNATarget
NM_121662.3
ncRNA:21   AAA-GUAGUAGUAGUAGUAGUA   1
  |||-||||||||||||||||||
targets:1187   UUUGCAUCAUCAUCAUCAUCAU   1208

2.0 Arabidopsis thaliana Homeodomain-like superfamily protein (KAN), mRNA Homeodomain-like superfamily protein(KAN) coding protein psRNATarget
AY050459.2
ncRNA:21   AA-AGUAGUAGUAGUAGUAGUA   1
  ||-|||||||||||||||||||
targets:137   UUAUCAUCAUCAUCAUCAUCAU   158

2.0 Arabidopsis thaliana AT4g36870/C7A10_490 mRNA, complete cds NA coding protein psRNATarget
NM_001342427.1
ncRNA:21   AA-AGUAGUAGUAGUAGUAGUA   1
  ||-|||||||||||||||||||
targets:178   UUAUCAUCAUCAUCAUCAUCAU   199

2.0 Arabidopsis thaliana BEL1-like homeodomain 2 (BLH2), mRNA BEL1-like homeodomain 2(BLH2) coding protein psRNATarget
AY912280.1
ncRNA:21   AA-AGUAGUAGUAGUAGUAGUA   1
  ||-|||||||||||||||||||
targets:37   UUAUCAUCAUCAUCAUCAUCAU   58

2.0 Arabidopsis thaliana FRO1-like protein mRNA, complete cds NA coding protein psRNATarget
AY030192.1
ncRNA:21   AAA-GUAGUAGUAGUAGUAGUA   1
  |||-||||||||||||||||||
targets:845   UUUGCAUCAUCAUCAUCAUCAU   866

2.0 Arabidopsis thaliana clone A1-2 KANADI protein (KAN) mRNA, complete cds NA coding protein psRNATarget
BX830211.1
ncRNA:21   AAA-GUAGUAGUAGUAGUAGUA   1
  |||-||||||||||||||||||
targets:788   UUUGCAUCAUCAUCAUCAUCAU   809

2.0 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB66ZC07 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) NA coding protein psRNATarget
NM_101213.3
ncRNA:21   AA-AGUAGUAGUAGUAGUAGUA   1
  ||-|||||||||||||||||||
targets:439   UUAUCAUCAUCAUCAUCAUCAU   460

2.0 Arabidopsis thaliana sulfotransferase 4C (ST4C), mRNA sulfotransferase 4C(ST4C) coding protein psRNATarget
AK118984.1
ncRNA:21   AA-AGUAGUAGUAGUAGUAGUA   1
  ||-|||||||||||||||||||
targets:439   UUAUCAUCAUCAUCAUCAUCAU   460

2.0 Arabidopsis thaliana At1g13430 mRNA for unknown protein, complete cds, clone: RAFL21-32-D02 NA coding protein psRNATarget
AY048688.1
ncRNA:21   AAA-GUAGUAGUAGUAGUAGUA   1
  |||-||||||||||||||||||
targets:522   UUUGCAUCAUCAUCAUCAUCAU   543

2.0 Arabidopsis thaliana GARP-like putative transcription factor KANADI1 (KAN1) mRNA, complete cds NA coding protein psRNATarget
NM_148478.2
ncRNA:21   AA-AGUAGUAGUAGUAGUAGUA   1
  ||-|||||||||||||||||||
targets:730   UUAUCAUCAUCAUCAUCAUCAU   751

2.0 Arabidopsis thaliana VQ motif-containing protein mRNA VQ motif-containing protein(AT1G21326) coding protein psRNATarget
BT026436.1
ncRNA:21   AAA-GUAGUAGUAGUAGUAGUA   1
  |||-||||||||||||||||||
targets:513   UUUGCAUCAUCAUCAUCAUCAU   534

2.0 Arabidopsis thaliana At5g16560 mRNA, complete cds NA coding protein psRNATarget
BT006116.1
ncRNA:21   AA-AGUAGUAGUAGUAGUAGUA   1
  ||-|||||||||||||||||||
targets:409   UUAUCAUCAUCAUCAUCAUCAU   430

2.0 Arabidopsis thaliana clone U51132 putative steroid sulfotransferase (At1g13430) mRNA, complete cds NA coding protein psRNATarget
NM_117229.4
ncRNA:21   AA-AGUAGUAGUAGUAGUAGUA   1
  ||-|||||||||||||||||||
targets:137   UUAUCAUCAUCAUCAUCAUCAU   158

2.0 Arabidopsis thaliana glutathione peroxidase 6 (GPX6), mRNA glutathione peroxidase 6(GPX6) coding protein psRNATarget
AY039863.1
ncRNA:21   AA-AGUAGUAGUAGUAGUAGUA   1
  ||-|||||||||||||||||||
targets:86   UUAUCAUCAUCAUCAUCAUCAU   107

2.0 Arabidopsis thaliana AT4g11600/T5C23_30 mRNA, complete cds NA coding protein psRNATarget
AF030132.1
ncRNA:21   AA-AGUAGUAGUAGUAGUAGUA   1
  ||-|||||||||||||||||||
targets:70   UUAUCAUCAUCAUCAUCAUCAU   91

2.0 Arabidopsis thaliana glutathione peroxidase mRNA, complete cds NA coding protein psRNATarget
AF030132.1
ncRNA:21   AAAGUAGUAGUAGUAGUAGUA   1
  **||||||||||||||||||*
targets:89   CAUCAUCAUCAUCAUCAUCAA   109

2.0 Arabidopsis thaliana glutathione peroxidase mRNA, complete cds NA coding protein psRNATarget
AY077655.1
ncRNA:21   AA-AGUAGUAGUAGUAGUAGUA   1
  ||-|||||||||||||||||||
targets:61   UUAUCAUCAUCAUCAUCAUCAU   82

2.0 Arabidopsis thaliana AT4g11600/T5C23_30 mRNA, complete cds NA coding protein psRNATarget
NM_117993.3
ncRNA:21   AAAGUAGUAGUAGUAGUAGUA   1
  *|||*||*|||||||||||||
targets:637   CUUCUUCUUCAUCAUCAUCAU   657

2.0 Arabidopsis thaliana myb domain protein 98 (MYB98), mRNA myb domain protein 98(MYB98) coding protein psRNATarget
NM_001343538.1
ncRNA:21   AA--AGUAGUAGUAGUAGUAGUA   1
  ||--|||||||||||||||||||
targets:728   UUGGUCAUCAUCAUCAUCAUCAU   750

2.5 Arabidopsis thaliana Protein kinase family protein mRNA Protein kinase family protein(AT5G18190) coding protein psRNATarget
BT004238.1
ncRNA:21   AAAG--UAGUAGUAGUAGUAGUA   1
  ||||--|||||||||||||||||
targets:677   UUUCUGAUCAUCAUCAUCAUCAU   699

2.5 Arabidopsis thaliana clone RAFL15-12-P18 (R20462) NA coding protein psRNATarget
NM_180165.2
ncRNA:21   AAAGU--AGUAGUAGUAGUAGUA   1
  |||||--||||||||||||||||
targets:375   UUUCACAUCAUCAUCAUCAUCAU   397

2.5 Arabidopsis thaliana hypothetical protein mRNA hypothetical protein(AT3G01860) coding protein psRNATarget
NM_111052.4
ncRNA:21   AAAGU--AGUAGUAGUAGUAGUA   1
  |||||--||||||||||||||||
targets:375   UUUCACAUCAUCAUCAUCAUCAU   397

2.5 Arabidopsis thaliana hypothetical protein mRNA hypothetical protein(AT3G01860) coding protein psRNATarget
AK229823.1
ncRNA:21   AAAGU--AGUAGUAGUAGUAGUA   1
  |||||--||||||||||||||||
targets:150   UUUCACAUCAUCAUCAUCAUCAU   172

2.5 Arabidopsis thaliana mRNA for hypothetical protein, complete cds, clone: RAFL21-94-G13 NA coding protein psRNATarget
NM_001334894.1
ncRNA:21   AAAGUAGUAGUAGUAGUAGUA   1
  **|||||||||||||||*||*
targets:1111   GAUCAUCAUCAUCAUCACCAA   1131

2.5 Arabidopsis thaliana NAC (No Apical Meristem) domain transcriptional regulator superfamily protein (SMB), mRNA NAC (No Apical Meristem) domain transcriptional regulator superfamily protein(SMB) coding protein psRNATarget
NM_105637.3
ncRNA:21   AA---AGUAGUAGUAGUAGUAGUA   1
  ||---|||||||||||||||||||
targets:416   UUCGAUCAUCAUCAUCAUCAUCAU   439

3.0 Arabidopsis thaliana TCP family transcription factor (TCP15), mRNA TCP family transcription factor(TCP15) coding protein psRNATarget

Reference

1 PMID:21940835
"High-resolution experimental and computational profiling of tissue-specific known and novel miRNAs in Arabidopsis";
Breakfield NW, Corcoran DL, Petricka JJ, Shen J, Sae-Seaw J, Rubio-Somoza I, Weigel D, Ohler U, Benfey PN;
Genome Res. 22:163-176(2012).
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