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BaseInfo

ncRNA ID gma-miR5040
Species Glycine max
Class miRNA
Genome position chr12:37354748-37354898 [-]
Reference genome v1.0
Source miRBase
Length 21
Mature sequence(if miRNA) 70 - AUGAUAUAUAACAAGCAUGAG - 90
Stem-loop(if miRNA) ------UAG     ------A    - AGC    -----  GAU  GAAACUCAAUGAGAAUAUUACUGAUUGAAGGUCAUGAUA
         UUUGG       UAAU A   UUUU     UA   AG                                       U
         |||||       |||| |   ||||     ||   ||                                       A
         GGGCC       CUAA U   UAGU     UG   UG                                       U
AAAGUAAGG     AAGUAAU    G -GA    UGGUU  ---  UUGUUGUAACAUAUAUUGUAAAUAUAGGAGUACGAACAA
Stem-loop sequence UAGUUUGGAUAAUAAGCUUUUUAGAUAGGAAACUCAAUGAGAAUAUUACUGAUUGAAGGUCAUGAUAUAUAACAAGCAUGAGGAUAUAAAUGUUAUAUACAAUGUUGUUGUGUUUGGUUGAUAGUGAAUCUAAUGAACCGGGGGAAUGAAA

Reference

1 PMID:21751852
"Transcriptional analysis of soybean root response to Fusarium virguliforme, the causal agent of sudden death syndrome";
Radwan O, Liu Y, Clough SJ;
Mol Plant Microbe Interact. 24:958-972(2011).