ncRNA ID | gma-miR5040 |
Species | Glycine max |
Class | miRNA |
Genome position | chr12:37354748-37354898 [-] |
Reference genome | v1.0 |
Source | miRBase |
Length | 21 |
Mature sequence(if miRNA) | 70 - AUGAUAUAUAACAAGCAUGAG - 90 |
Stem-loop(if miRNA) |
------UAG ------A - AGC ----- GAU GAAACUCAAUGAGAAUAUUACUGAUUGAAGGUCAUGAUA UUUGG UAAU A UUUU UA AG U ||||| |||| | |||| || || A GGGCC CUAA U UAGU UG UG U AAAGUAAGG AAGUAAU G -GA UGGUU --- UUGUUGUAACAUAUAUUGUAAAUAUAGGAGUACGAACAA |
Stem-loop sequence | UAGUUUGGAUAAUAAGCUUUUUAGAUAGGAAACUCAAUGAGAAUAUUACUGAUUGAAGGUCAUGAUAUAUAACAAGCAUGAGGAUAUAAAUGUUAUAUACAAUGUUGUUGUGUUUGGUUGAUAGUGAAUCUAAUGAACCGGGGGAAUGAAA |
1 | PMID:21751852
"Transcriptional analysis of soybean root response to Fusarium virguliforme, the causal agent of sudden death syndrome"; Radwan O, Liu Y, Clough SJ; Mol Plant Microbe Interact. 24:958-972(2011). |