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BaseInfo

ncRNA ID	gma-miR1520g
Species	Glycine max
Class	miRNA
Genome position	chr12:32752044-32752151 [-]
Reference genome	v1.0
Source	miRBase
Length	24
Mature sequence(if miRNA)	8 - CAAUCAGAACAUGACACGUGACAA - 31
Stem-loop(if miRNA)	C                  A     A  UUGAA  CAUGGAAGAUAA AUGAUGA UGUCACGUGUCAUGUUCU AUUGA UC     UC            A ||||||| |||||||||||||||||| ||||| ||     ||            A UACUACU ACAGUGCACAGUACAAGA UAACU AG     CU            U        A                  C     -  --UUA  AUUGUUAUUACA
Stem-loop sequence	AUGAUGACUGUCACGUGUCAUGUUCUAAUUGAAUCUUGAAUCCAUGGAAGAUAAAAUACAUUAUUGUUAUCAUUGAUCAAUCAGAACAUGACACGUGACAAUCAUCAU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_003518407.3	ncRNA:24   AACAGUGCACAGUACAAGACUAAC   1   *||||||||||||*|||||||||| targets:1636   CUGUCACGUGUCACGUUCUGAUUG   1659 Target Full Sequence	1.5	PREDICTED: Glycine max UPF0481 protein At3g47200-like (LOC100803577), mRNA	UPF0481 protein At3g47200-like(LOC100803577)	coding protein	psRNATarget
HI410444.1	ncRNA:24   AACAGUGCACAGUACAAGACUAAC   1   *||||||||||||||||||*|||* targets:17   CUGUCACGUGUCAUGUUCUAAUUA   40 Target Full Sequence	2.5	Sequence 8569 from Patent EP2074227	NA	coding protein	psRNATarget
LQ242574.1	ncRNA:24   AACAGUGCACAGUACAAGACUAAC   1   *||||||||||||||||||*|||* targets:17   CUGUCACGUGUCAUGUUCUAAUUA   40 Target Full Sequence	2.5	Sequence 8569 from Patent EP2985353	NA	coding protein	psRNATarget
JB170905.1	ncRNA:24   AACAGUGCACAGUACAAGACUAAC   1   *||||||||||||||||||*|||* targets:17   CUGUCACGUGUCAUGUUCUAAUUA   40 Target Full Sequence	2.5	Sequence 8569 from Patent EP2559767	NA	coding protein	psRNATarget
LQ242575.1	ncRNA:24   AACAGUGCACAGUACAAGACUAAC   1   *||||||||||||||||||*|||* targets:78   CUGUCACGUGUCAUGUUCUAAUUA   101 Target Full Sequence	2.5	Sequence 8570 from Patent EP2985353	NA	coding protein	psRNATarget
HI410445.1	ncRNA:24   AACAGUGCACAGUACAAGACUAAC   1   *||||||||||||||||||*|||* targets:78   CUGUCACGUGUCAUGUUCUAAUUA   101 Target Full Sequence	2.5	Sequence 8570 from Patent EP2074227	NA	coding protein	psRNATarget
JB170906.1	ncRNA:24   AACAGUGCACAGUACAAGACUAAC   1   *||||||||||||||||||*|||* targets:78   CUGUCACGUGUCAUGUUCUAAUUA   101 Target Full Sequence	2.5	Sequence 8570 from Patent EP2559767	NA	coding protein	psRNATarget

Reference

1	PMID:20122185 "Prediction of novel miRNAs and associated target genes in Glycine max"; Joshi T, Yan Z, Libault M, Jeong DH, Park S, Green PJ, Sherrier DJ, Farmer A, May G, Meyers BC, Xu D, Stacey G; BMC Bioinformatics. 11 Suppl 1:S14(2010).