| ncRNA ID | gma-miR5762 |
| Species | Glycine max |
| Class | miRNA |
| Genome position | chr12:648893-649030 [+] |
| Reference genome | v1.0 |
| Source | miRBase |
| Length | 21 |
| Mature sequence(if miRNA) | 108 - UCAUAGGAGGAAUCAACUGGC - 128 |
| Stem-loop(if miRNA) |
U C A C A AA AUA - UU GUUAUCAGUUUG GUUAGACCAGUCAG UGA UCCUCUUAUGAU AAG GCUGU UGC UCA G UU A |||||||||||||| ||| |||||||||||| ||| ||||| ||| ||| | || A CAAUCUGGUCGGUC ACU AGGAGGAUACUA UUC CGACA AUG CAU A AG C A A A C C -- --C U -- UUUCUUUUAUGC |
| Stem-loop sequence | UGUUAGACCAGUCAGCUGAAUCCUCUUAUGAUCAAGAGCUGUAAUGCAUAUCAGUUUUGUUAUCAGUUUGAACCGUAUUUUCUUUGAAUUACCGUAACAGCCCUUCAUCAUAGGAGGAAUCAACUGGCUGGUCUAACA |
| Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| XM_003536896.3 |
|
2.5 | PREDICTED: Glycine max protein SCARECROW-like (LOC100785242), mRNA | protein SCARECROW-like(LOC100785242) | coding protein | psRNATarget |
| 1 | PMID:22156213
"MicroRNAs as master regulators of the plant NB-LRR defense gene family via the production of phased, trans-acting siRNAs"; Zhai J, Jeong DH, De Paoli E, Park S, Rosen BD, Li Y, Gonzalez AJ, Yan Z, Kitto SL, Grusak MA, Jackson SA, Stacey G, Cook DR, Green PJ, Sherrier DJ, Meyers BC; Genes Dev. 25:2540-2553(2011). |