| ncRNA ID | gma-miR393a |
| Species | Glycine max |
| Class | miRNA |
| Genome position | chr11:36567520-36567639 [+] |
| Reference genome | v1.0 |
| Source | miRBase |
| Length | 21 |
| Mature sequence(if miRNA) | 11 - UCCAAAGGGAUCGCAUUGAUC - 31 |
| Stem-loop(if miRNA) |
G C C U CC C C CUUCUCUCU GAGGAGG AUCCAAAGGGAU GCAU GAUCCCAAAU AAG UU AAUAUU U ||||||| |||||||||||| |||| |||||||||| ||| || |||||| UUCCUCU UAGGUUUCCCUA CGUA CUAGGGUUUA UUU AA UUAUAA U U U U - -- U - AACUCACCC |
| Stem-loop sequence | GGAGGAGGCAUCCAAAGGGAUCGCAUUGAUCCCAAAUCCAAGCUUCAAUAUUCUUCUCUCUUUCCCACUCAAAAUAUUAAUUUUAUUUGGGAUCAUGCUAUCCCUUUGGAUUUCUCCUUU |
| Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AK286220.1 |
|
1.0 | Glycine max cDNA, clone: GMFL01-24-D14 | NA | coding protein | psRNATarget | |||||||||
| XM_003548885.3 |
|
1.0 | PREDICTED: Glycine max protein AUXIN SIGNALING F-BOX 2 (LOC100788209), mRNA | protein AUXIN SIGNALING F-BOX 2(LOC100788209) | coding protein | psRNATarget | |||||||||
| XM_003553924.3 |
|
1.0 | PREDICTED: Glycine max protein AUXIN SIGNALING F-BOX 2-like (LOC100812516), mRNA | protein AUXIN SIGNALING F-BOX 2-like(LOC100812516) | coding protein | psRNATarget | |||||||||
| XM_003518079.3 |
|
2.0 | PREDICTED: Glycine max protein AUXIN SIGNALING F-BOX 2-like (LOC100788040), mRNA | protein AUXIN SIGNALING F-BOX 2-like(LOC100788040) | coding protein | psRNATarget |
| 1 | PMID:18402695
"Novel and nodulation-regulated microRNAs in soybean roots"; Subramanian S, Fu Y, Sunkar R, Barbazuk WB, Zhu JK, Yu O; BMC Genomics. 9:160(2008). |