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BaseInfo

ncRNA ID ath-miR419
Species Arabidopsis thaliana
Class miRNA
Genome position chr4:15660370-15660475 [+]
Reference genome TAIR10
Source miRBase
Length 21
Mature sequence(if miRNA) 4 - UUAUGAAUGCUGAGGAUGUUG - 24
Stem-loop(if miRNA) AAAUUA   A       G     G  ---AUUA        G    GUC      U
      UGA UGCUGAG AUGUU UU       CGAGCAAU AGAU   UUUUUU A
      ||| ||||||| ||||| ||       |||||||| ||||   ||||||
      ACU ACGAUUC UACAG AG       GUUCGUUG UUUA   AAAAAA A
-UUUAA   -       -     G  AACGUUC        G    --A      A
Stem-loop sequence AAAUUAUGAAUGCUGAGGAUGUUGUUAUUACGAGCAAUGAGAUGUCUUUUUUUAAAAAAAAAAAUUUGGUUGCUUGCUUGCAAGAGGACAUCUUAGCAUCAAAUUU

Reference

1 PMID:15345049
"Prediction and identification of Arabidopsis thaliana microRNAs and their mRNA targets";
Wang XJ, Reyes JL, Chua NH, Gaasterland T;
Genome Biol. 5:R65(2004).
2 PMID:16669754
"MicroRNAS and their regulatory roles in plants";
Jones-Rhoades MW, Bartel DP, Bartel B;
Annu Rev Plant Biol. 57:19-53(2006).