| ncRNA ID | gma-miR5671a |
| Species | Glycine max |
| Class | miRNA |
| Genome position | chr11:32789075-32789193 [-] |
| Reference genome | v1.0 |
| Source | miRBase |
| Length | 21 |
| Mature sequence(if miRNA) | 89 - CAUGGAAGUGAAUCGGGUGAC - 109 |
| Stem-loop(if miRNA) |
- UG - U UUCCAUG AUCUCUCCU C C AUUGAUUCAUCAUGGAAG AAU CGGG GACUC UUG CCA CACCU C |||||||||||||||||| ||| |||| ||||| ||| ||| ||||| U UAACUAAGUGGUACCUUC UUA GCCC UUGAG AAC GGU GUGGA U C GU A U -UCUUUA --------- A A |
| Stem-loop sequence | AUUGAUUCAUCAUGGAAGUGAAUCGGGUGACUCUUCCAUGUUGAUCUCUCCUCCACCACCUCCUUAAGGUGAUGGCAAAUUUCUGAGUUUCCCGAAUUUGCUUCCAUGGUGAAUCAAUC |
| Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| XM_014761672.1 |
|
2.0 | PREDICTED: Glycine max cation/H(+) antiporter 3-like (LOC100785558), mRNA | cation/H(+) antiporter 3-like(LOC100785558) | coding protein | psRNATarget | |||||||||
| XM_003528737.3 |
|
2.5 | PREDICTED: Glycine max laccase-6-like (LOC100803876), mRNA | laccase-6-like(LOC100803876) | coding protein | psRNATarget |
| 1 | PMID:21219599
"Identification of miRNAs and their target genes in developing soybean seeds by deep sequencing"; Song QX, Liu YF, Hu XY, Zhang WK, Ma B, Chen SY, Zhang JS; BMC Plant Biol. 11:5(2011). |
| 2 | PMID:22156213
"MicroRNAs as master regulators of the plant NB-LRR defense gene family via the production of phased, trans-acting siRNAs"; Zhai J, Jeong DH, De Paoli E, Park S, Rosen BD, Li Y, Gonzalez AJ, Yan Z, Kitto SL, Grusak MA, Jackson SA, Stacey G, Cook DR, Green PJ, Sherrier DJ, Meyers BC; Genes Dev. 25:2540-2553(2011). |