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BaseInfo

ncRNA ID gma-miR1521b
Species Glycine max
Class miRNA
Genome position chr11:18237864-18238014 [+]
Reference genome v1.0
Source miRBase
Length 23
Mature sequence(if miRNA) 61 - GACUGUCACGUGUCAUAAUCAUA - 83
Stem-loop(if miRNA) ----   --   G    ---   --   UUUGGCAGUCAACAUUUUCCAUUAACAGUCAAUGAGUAAUGAUGACUGUCAC
    CCA  AUA GAUU   AUG  ACA                                                    G
    |||  ||| ||||   |||  |||
    GCA  UGU GGUA   AGU  UAG                                                    U
UUUU   AU   C    CAU   AU   AAUAACCUACAAUUUUACCACAUGCUUUUAAUUACAGGUUAUACUAAUACUG
Stem-loop sequence CCAAUAGGAUUAUGACAUUUGGCAGUCAACAUUUUCCAUUAACAGUCAAUGAGUAAUGAUGACUGUCACGUGUCAUAAUCAUAUUGGACAUUAAUUUUCGUACACCAUUUUAACAUCCAAUAAGAUUAUGAUACAUGGCUGUUAACGUUUU

Reference

1 PMID:21751852
"Transcriptional analysis of soybean root response to Fusarium virguliforme, the causal agent of sudden death syndrome";
Radwan O, Liu Y, Clough SJ;
Mol Plant Microbe Interact. 24:958-972(2011).