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BaseInfo

ncRNA ID	gma-miR4350
Species	Glycine max
Class	miRNA
Genome position	chr11:12745551-12745710 [-]
Reference genome	v1.0
Source	miRBase
Length	22
Mature sequence(if miRNA)	132 - UCAAAUGAUUUUGUGUCGUUGG - 153
Stem-loop(if miRNA)	U                   A                  C            C   --     U UCAAAAUUCAAAUGAU UUGUGUCGUUGGUUCAUCA UUCAAAAUUUUCAAUAUG CAUUUUCACAAA UCU  GGUAA C |||||||||||||||| ||||||||||||||||||| |||||||||||||||||| |||||||||||| |||  ||||| AGUUUUAAGUUUAUUA AACACGGCAAUCAAGUAGU AAGUUUUAAAAGUUAUAC GUAAAAGUGUUU AGA  CCAUU G                 C                   C                  A            A   AA     A
Stem-loop sequence	UCAAAAUUCAAAUGAUUUUGUGUCGUUGGUUCAUCAAUUCAAAAUUUUCAAUAUGCCAUUUUCACAAACUCUGGUAAUCGAUUACCAAAGAAUUUGUGAAAAUGACAUAUUGAAAAUUUUGAACUGAUGAACUAACGGCACAACAUUAUUUGAAUUUUGA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_014771248.1	ncRNA:22   GGUUGCUGUGUUUUAGUAAACU   1   =*=||||=|||||||||||*|| targets:1324   UAGACGAUACAAAAUCAUUCGA   1345 Target Full Sequence	2.5	PREDICTED: Glycine max putative receptor-like protein kinase At4g00960 (LOC100775428), mRNA	putative receptor-like protein kinase At4g00960(LOC100775428)	coding protein	psRNATarget
NM_001254008.1	ncRNA:22   GG---UUGCUGUGUUUUAGUAAACU   1   ||---|||||*||||||||*||||| targets:539   CCGUAAACGAAACAAAAUCCUUUGA   563 Target Full Sequence	2.5	Glycine max transcription repressor MYB5-like (LOC100785540), mRNA	transcription repressor MYB5-like(LOC100785540)	coding protein	psRNATarget
XM_003527645.3	ncRNA:22   GGUUGCUGUGUUUUAGUAAACU   1   |=|=*||||||||||||||||= targets:1   CUAGGGACACAAAAUCAUUUGG   22 Target Full Sequence	3.0	PREDICTED: Glycine max uncharacterized LOC100817035 (LOC100817035), mRNA	uncharacterized LOC100817035(LOC100817035)	coding protein	psRNATarget

Reference

1	PMID:20122185 "Prediction of novel miRNAs and associated target genes in Glycine max"; Joshi T, Yan Z, Libault M, Jeong DH, Park S, Green PJ, Sherrier DJ, Farmer A, May G, Meyers BC, Xu D, Stacey G; BMC Bioinformatics. 11 Suppl 1:S14(2010).