ncRNA ID | gma-miR5380b |
Species | Glycine max |
Class | miRNA |
Genome position | chr11:7821070-7821206 [-] |
Reference genome | v1.0 |
Source | miRBase |
Length | 24 |
Mature sequence(if miRNA) | 20 - GAAAAUGAAUGAUGAGGAUGGGGA - 43 |
Stem-loop(if miRNA) |
      C                        C                  G        AA   U   GUAACU UUUUAGAGUUACUCCUCAUCCUCA CAUUCAUUUUCUUAAGAU UAAUGGUU  AAU AGU |||||| |||||||||||||||||||||||| |||||||||||||||||| ||||||||  ||| ||U CAUUGA AAAAUCUCAAUGAGGGGUAGGAGU GUAAGUAAAAGAAUUUUA AUUACCAA  UUA UCA       A                        A                  G        CA   U   |
Stem-loop sequence | GUAACUCUUUUAGAGUUACUCCUCAUCCUCACCAUUCAUUUUCUUAAGAUGUAAUGGUUAAAAUUAGUUACUUAUUACAACCAUUAGAUUUUAAGAAAAUGAAUGAUGAGGAUGGGGAGUAACUCUAAAAAAGUUAC |
1 | PMID:21663675
"Identification of novel soybean microRNAs involved in abiotic and biotic stresses"; Kulcheski FR, de Oliveira LF, Molina LG, Almerao MP, Rodrigues FA, Marcolino J, Barbosa JF, Stolf-Moreira R, Nepomuceno AL, Marcelino-Guimaraes FC, Abdelnoor RV, Nascimento LC, Carazzolle MF, Pereira GA, Margis R; BMC Genomics. 12:307(2011). |
2 | PMID:24475082
"Systems and evolutionary characterization of microRNAs and their underlying regulatory networks in soybean cotyledons"; Goettel W, Liu Z, Xia J, Zhang W, Zhao PX, An YQ; PLoS One. 9:e86153(2014). |