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BaseInfo

ncRNA ID gma-miR5380a
Species Glycine max
Class miRNA
Genome position chr11:7787358-7787494 [+]
Reference genome v1.0
Source miRBase
Length 24
Mature sequence(if miRNA) 95 - GAAAAUGAAUGAUGAGGAUGGGGA - 118
Stem-loop(if miRNA)       C                        C                           AA   U  
GUAACU UUUUAGAGUUACUUCUCAUCCUCA CAUUCAUUUUUUUAAGAUCUAAUGGUU  AAU AGU
|||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||  ||| ||U
CAUUGA AAAAUCUCAAUGAGGGGUAGGAGU GUAAGUAAAAGAAUUUUAGAUUACCAA  UUA UCA
      A                        A                           CA   U  
Stem-loop sequence GUAACUCUUUUAGAGUUACUUCUCAUCCUCACCAUUCAUUUUUUUAAGAUCUAAUGGUUAAAAUUAGUUACUUAUUACAACCAUUAGAUUUUAAGAAAAUGAAUGAUGAGGAUGGGGAGUAACUCUAAAAAAGUUAC

Reference

1 PMID:21663675
"Identification of novel soybean microRNAs involved in abiotic and biotic stresses";
Kulcheski FR, de Oliveira LF, Molina LG, Almerao MP, Rodrigues FA, Marcolino J, Barbosa JF, Stolf-Moreira R, Nepomuceno AL, Marcelino-Guimaraes FC, Abdelnoor RV, Nascimento LC, Carazzolle MF, Pereira GA, Margis R;
BMC Genomics. 12:307(2011).