ncRNA ID | gma-miR5380a |
Species | Glycine max |
Class | miRNA |
Genome position | chr11:7787358-7787494 [+] |
Reference genome | v1.0 |
Source | miRBase |
Length | 24 |
Mature sequence(if miRNA) | 95 - GAAAAUGAAUGAUGAGGAUGGGGA - 118 |
Stem-loop(if miRNA) |
      C                        C                           AA   U   GUAACU UUUUAGAGUUACUUCUCAUCCUCA CAUUCAUUUUUUUAAGAUCUAAUGGUU  AAU AGU |||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||  ||| ||U CAUUGA AAAAUCUCAAUGAGGGGUAGGAGU GUAAGUAAAAGAAUUUUAGAUUACCAA  UUA UCA       A                        A                           CA   U   |
Stem-loop sequence | GUAACUCUUUUAGAGUUACUUCUCAUCCUCACCAUUCAUUUUUUUAAGAUCUAAUGGUUAAAAUUAGUUACUUAUUACAACCAUUAGAUUUUAAGAAAAUGAAUGAUGAGGAUGGGGAGUAACUCUAAAAAAGUUAC |
1 | PMID:21663675
"Identification of novel soybean microRNAs involved in abiotic and biotic stresses"; Kulcheski FR, de Oliveira LF, Molina LG, Almerao MP, Rodrigues FA, Marcolino J, Barbosa JF, Stolf-Moreira R, Nepomuceno AL, Marcelino-Guimaraes FC, Abdelnoor RV, Nascimento LC, Carazzolle MF, Pereira GA, Margis R; BMC Genomics. 12:307(2011). |