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BaseInfo

ncRNA ID	gma-miR1520p
Species	Glycine max
Class	miRNA
Genome position	chr11:4653751-4653889 [+]
Reference genome	v1.0
Source	miRBase
Length	24
Mature sequence(if miRNA)	8 - AUGUUGUUAUUGGAUGAUGACGGU - 31
Stem-loop(if miRNA)	G  A    U    AG A      AAU    ACUUC        U ACAUGUCAUGUUGUUAUUGGAUGAUGAC GU ACAU UUAU  U UGAUUG   GUCA     AUGAAAGA A |||||||||||||||||||||||||||| || |||| ||||  | ||||||   ||||     |||||||| A UGUACAGUGCAACAAUAACCUACUACUG CA UGUA AAUA  A ACUAAC   CAGU     UACUUUUU U                             A  G    C    CA A      ---    -----        U
Stem-loop sequence	ACAUGUCAUGUUGUUAUUGGAUGAUGACGGUAACAUUUUAUAGUAUGAUUGAAUGUCAACUUCAUGAAAGAUAAUUUUUUUCAUUGACCAAUCAAAACAUAACAUGUGACAGUCAUCAUCCAAUAACAACGUGACAUGU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
JB170906.1	ncRNA:24   UGGCAGUAGUAGGUUAUUGUUGUA   1   =|*||=||||||||||||*||||| targets:167   GCAGUUAUCAUCCAAUAAGAACAU   190 Target Full Sequence	2.5	Sequence 8570 from Patent EP2559767	NA	coding protein	psRNATarget
LQ242575.1	ncRNA:24   UGGCAGUAGUAGGUUAUUGUUGUA   1   =|*||=||||||||||||*||||| targets:167   GCAGUUAUCAUCCAAUAAGAACAU   190 Target Full Sequence	2.5	Sequence 8570 from Patent EP2985353	NA	coding protein	psRNATarget
HI410445.1	ncRNA:24   UGGCAGUAGUAGGUUAUUGUUGUA   1   =|*||=||||||||||||*||||| targets:167   GCAGUUAUCAUCCAAUAAGAACAU   190 Target Full Sequence	2.5	Sequence 8570 from Patent EP2074227	NA	coding protein	psRNATarget

Reference

1	PMID:20122185 "Prediction of novel miRNAs and associated target genes in Glycine max"; Joshi T, Yan Z, Libault M, Jeong DH, Park S, Green PJ, Sherrier DJ, Farmer A, May G, Meyers BC, Xu D, Stacey G; BMC Bioinformatics. 11 Suppl 1:S14(2010).