ncRNA ID | gma-miR5675 |
Species | Glycine max |
Class | miRNA |
Genome position | chr11:70293-70543 [+] |
Reference genome | v1.0 |
Source | miRBase |
Length | 21 |
Mature sequence(if miRNA) | 221 - UAGAGACGACAACAAUGGAAA - 241 |
Stem-loop(if miRNA) |
C           C       C              CAA    CU               U          A  A              ------AU      G       A     GAA    G  UG  GUGAUUUUUGU UCCAUUG UGUUGUCUCUAUCU   AUUU  UUUUUGGUGUCUGAG UAGGGUUCUU AA UUUUUAUUUGCAUU        AUUUGC UCUUAUA UAAUU   UAUA GA  A  ||||||||||| ||||||| ||||||||||||||   ||||  ||||||||||||||| |||||||||| || ||||||||||||||        |||||| ||||||| |||||   |||| ||  A  CACUAAAAACA AGGUAAC ACAGCAGAGAUAGA   UAAA  AAAAACCACAGACUC AUUCCAAGGA UU AAAAAUAAACGUAG        UAGGCG AGAAUAU AUUAA   AUAU UU  U -           A       A              -AC    CU               U          C  G              ACUAUCAU      A       C     ACG    G  UC |
Stem-loop sequence | CGUGAUUUUUGUCUCCAUUGCUGUUGUCUCUAUCUCAAAUUUCUUUUUUGGUGUCUGAGUUAGGGUUCUUAAAAUUUUUAUUUGCAUUAUAUUUGCGUCUUAUAAUAAUUGAAUAUAGGAUGAAUCUUUGUAUAGCAAAUUACUAUAAGAAGCGGAUUACUAUCAGAUGCAAAUAAAAAGUUCAGGAACCUUAUCUCAGACACCAAAAAUCAAAUCAAGAUAGAGACGACAACAAUGGAAACAAAAAUCAC |
1 | PMID:21219599
"Identification of miRNAs and their target genes in developing soybean seeds by deep sequencing"; Song QX, Liu YF, Hu XY, Zhang WK, Ma B, Chen SY, Zhang JS; BMC Plant Biol. 11:5(2011). |