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BaseInfo

ncRNA ID gma-miR5675
Species Glycine max
Class miRNA
Genome position chr11:70293-70543 [+]
Reference genome v1.0
Source miRBase
Length 21
Mature sequence(if miRNA) 221 - UAGAGACGACAACAAUGGAAA - 241
Stem-loop(if miRNA) C           C       C              CAA    CU               U          A  A              ------AU      G       A     GAA    G  UG
 GUGAUUUUUGU UCCAUUG UGUUGUCUCUAUCU   AUUU  UUUUUGGUGUCUGAG UAGGGUUCUU AA UUUUUAUUUGCAUU        AUUUGC UCUUAUA UAAUU   UAUA GA  A
 ||||||||||| ||||||| ||||||||||||||   ||||  ||||||||||||||| |||||||||| || ||||||||||||||        |||||| ||||||| |||||   |||| ||  A
 CACUAAAAACA AGGUAAC ACAGCAGAGAUAGA   UAAA  AAAAACCACAGACUC AUUCCAAGGA UU AAAAAUAAACGUAG        UAGGCG AGAAUAU AUUAA   AUAU UU  U
-           A       A              -AC    CU               U          C  G              ACUAUCAU      A       C     ACG    G  UC
Stem-loop sequence CGUGAUUUUUGUCUCCAUUGCUGUUGUCUCUAUCUCAAAUUUCUUUUUUGGUGUCUGAGUUAGGGUUCUUAAAAUUUUUAUUUGCAUUAUAUUUGCGUCUUAUAAUAAUUGAAUAUAGGAUGAAUCUUUGUAUAGCAAAUUACUAUAAGAAGCGGAUUACUAUCAGAUGCAAAUAAAAAGUUCAGGAACCUUAUCUCAGACACCAAAAAUCAAAUCAAGAUAGAGACGACAACAAUGGAAACAAAAAUCAC

Reference

1 PMID:21219599
"Identification of miRNAs and their target genes in developing soybean seeds by deep sequencing";
Song QX, Liu YF, Hu XY, Zhang WK, Ma B, Chen SY, Zhang JS;
BMC Plant Biol. 11:5(2011).