| ncRNA ID | gma-miR4372a |
| Species | Glycine max |
| Class | miRNA |
| Genome position | chr10:48883289-48883409 [-] |
| Reference genome | v1.0 |
| Source | miRBase |
| Length | 24 |
| Mature sequence(if miRNA) | 5 - UAAAAUCGUGACAUGUGACGGUCA - 28 |
| Stem-loop(if miRNA) |
A UA C ------ UCA UUA AA ACGUUGAUC UCAUAUGUCA AUUUUA UGGA CGUUAAUU UGUAU AUU C ||||||||| |||||||||| |||||| |||| |||||||| ||||| ||| UGUAACUGG AGUGUACAGU UAAAAU ACCU GCAAUUAA ACAUA UAA G C GC A CCAACU UCC -UC CU |
| Stem-loop sequence | ACGUUGAUCAUCAUAUGUCAUAAUUUUACUGGACGUUAAUUUCAUGUAUUUAAUUAACGUCAAUCUAUACACCUAAUUAACGUCAACCUCCAAUAAAAUCGUGACAUGUGACGGUCAAUGU |
| Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| XM_006602607.2 |
|
2.5 | PREDICTED: Glycine max transcription factor TGA7-like (LOC100794752), mRNA | transcription factor TGA7-like(LOC100794752) | coding protein | psRNATarget | |||||||||
| XM_003529834.3 |
|
2.5 | PREDICTED: Glycine max laccase-6-like (LOC100789406), transcript variant X2, mRNA | laccase-6-like(LOC100789406) | coding protein | psRNATarget | |||||||||
| XM_014777738.1 |
|
2.5 | PREDICTED: Glycine max laccase-6-like (LOC100789406), transcript variant X1, mRNA | laccase-6-like(LOC100789406) | coding protein | psRNATarget |
| 1 | PMID:20122185
"Prediction of novel miRNAs and associated target genes in Glycine max"; Joshi T, Yan Z, Libault M, Jeong DH, Park S, Green PJ, Sherrier DJ, Farmer A, May G, Meyers BC, Xu D, Stacey G; BMC Bioinformatics. 11 Suppl 1:S14(2010). |