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BaseInfo

ncRNA ID gma-miR167h
Species Glycine max
Class miRNA
Genome position chr10:46574263-46574351 [+]
Reference genome v1.0
Source miRBase
Length 24
Mature sequence(if miRNA) 61 - AUCAUGCUGGCAGCUUCAACUGGU - 84
Stem-loop(if miRNA) -A        G    A      -        GAU      A  G
  ACUACUAG UGAA CUGCCA CAUGAUCU   CUUUCC CA C
  |||||||| |||| |||||| ||||||||   |||||| || A
  UGAUGGUC ACUU GACGGU GUACUAGA   GAAGGG GU A
GG        A    C      C        AUU      A  G
Stem-loop sequence AACUACUAGGUGAAACUGCCACAUGAUCUGAUCUUUCCACAGCAAGUGAGGGAAGUUAAGAUCAUGCUGGCAGCUUCAACUGGUAGUGG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
HI410605.1
ncRNA:24   UGGUCAACUUCGACGGUCGUACUA   1
  |*||||||||||||||||||||||
targets:5   AGCAGUUGAAGCUGCCAGCAUGAU   28

0.0 Sequence 8730 from Patent EP2074227 NA coding protein psRNATarget
JB171066.1
ncRNA:24   UGGUCAACUUCGACGGUCGUACUA   1
  |*||||||||||||||||||||||
targets:5   AGCAGUUGAAGCUGCCAGCAUGAU   28

0.0 Sequence 8730 from Patent EP2559767 NA coding protein psRNATarget
LQ242735.1
ncRNA:24   UGGUCAACUUCGACGGUCGUACUA   1
  |*||||||||||||||||||||||
targets:5   AGCAGUUGAAGCUGCCAGCAUGAU   28

0.0 Sequence 8730 from Patent EP2985353 NA coding protein psRNATarget
JB171012.1
ncRNA:24   UGGUCAACUUCGACGGUCGUACUA   1
  |**=||||||||||||||||||||
targets:5   AGAGGUUGAAGCUGCCAGCAUGAU   28

0.0 Sequence 8676 from Patent EP2559767 NA coding protein psRNATarget
LQ242681.1
ncRNA:24   UGGUCAACUUCGACGGUCGUACUA   1
  |**=||||||||||||||||||||
targets:5   AGAGGUUGAAGCUGCCAGCAUGAU   28

0.0 Sequence 8676 from Patent EP2985353 NA coding protein psRNATarget
HI410551.1
ncRNA:24   UGGUCAACUUCGACGGUCGUACUA   1
  |**=||||||||||||||||||||
targets:5   AGAGGUUGAAGCUGCCAGCAUGAU   28

0.0 Sequence 8676 from Patent EP2074227 NA coding protein psRNATarget

Reference

1 PMID:21504877
"MicroRNAs in the shoot apical meristem of soybean";
Wong CE, Zhao YT, Wang XJ, Croft L, Wang ZH, Haerizadeh F, Mattick JS, Singh MB, Carroll BJ, Bhalla PL;
J Exp Bot. 62:2495-2506(2011).
2 PMID:21751852
"Transcriptional analysis of soybean root response to Fusarium virguliforme, the causal agent of sudden death syndrome";
Radwan O, Liu Y, Clough SJ;
Mol Plant Microbe Interact. 24:958-972(2011).