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BaseInfo

ncRNA ID gma-miR4388
Species Glycine max
Class miRNA
Genome position chr10:45933242-45933401 [-]
Reference genome v1.0
Source miRBase
Length 24
Mature sequence(if miRNA) 4 - AAUCUUAGGGACCAAAUUGACAGC - 27
Stem-loop(if miRNA) GA A                                             C  - UUU CAUUCCGUUUGUCACGGUGUUAG
  C CUGUCAAUUUGGUCUUUAAGAUUUAAAAAAUGUCAAAAUGAUCCU GA C   A                       G
  | ||||||||||||||||||||||||||||||||||||||||||||| || |   |
  G GACAGUUAAACCAGGGAUUCUAAAUUUUUUAUAGUUUUACUAGGA CC U   G                       A
CC C                                             A  G --- CAAUCAGGGACGGCAAUCAUCAG
Stem-loop sequence GACACUGUCAAUUUGGUCUUUAAGAUUUAAAAAAUGUCAAAAUGAUCCUCGACUUUACAUUCCGUUUGUCACGGUGUUAGGAGACUACUAACGGCAGGGACUAACGUGCCAAGGAUCAUUUUGAUAUUUUUUAAAUCUUAGGGACCAAAUUGACAGCGCC

Reference

1 PMID:20122185
"Prediction of novel miRNAs and associated target genes in Glycine max";
Joshi T, Yan Z, Libault M, Jeong DH, Park S, Green PJ, Sherrier DJ, Farmer A, May G, Meyers BC, Xu D, Stacey G;
BMC Bioinformatics. 11 Suppl 1:S14(2010).