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BaseInfo

ncRNA ID gma-miR4378a
Species Glycine max
Class miRNA
Genome position chr10:43808132-43808294 [-]
Reference genome v1.0
Source miRBase
Length 24
Mature sequence(if miRNA) 138 - AUAGGACUGUCUUAGAAUGGUGUA - 161
Stem-loop(if miRNA)     -A           G    G            A         A   CAAACUCGUCUUAGAAUGUCAUACAUUUUAAG
UCAU  GGACUGUCUUA AAUG UGUACAUUCUAA ACAGUCUCC ACA                                A
||||  ||||||||||| |||| |||||||||||| ||||||||| |||
AGUG  UCUGGCAGAAU UUAC ACAUGUAAGAUU UGUUAGGGG CCU                                C
    CG           A    A            C         U   AUUUAGGUAGAAUCUCACAUACUGUAUUCGGG
Stem-loop sequence UCAUAGGACUGUCUUAGAAUGGUGUACAUUCUAAAACAGUCUCCAACACAAACUCGUCUUAGAAUGUCAUACAUUUUAAGACGGGCUUAUGUCAUACACUCUAAGAUGGAUUUAUCCUGGGGAUUGUCUUAGAAUGUACAACAUUAUAAGACGGUCUGCGUGA

Reference

1 PMID:20122185
"Prediction of novel miRNAs and associated target genes in Glycine max";
Joshi T, Yan Z, Libault M, Jeong DH, Park S, Green PJ, Sherrier DJ, Farmer A, May G, Meyers BC, Xu D, Stacey G;
BMC Bioinformatics. 11 Suppl 1:S14(2010).