ncRNA ID | gma-miR4378a |
Species | Glycine max |
Class | miRNA |
Genome position | chr10:43808132-43808294 [-] |
Reference genome | v1.0 |
Source | miRBase |
Length | 24 |
Mature sequence(if miRNA) | 138 - AUAGGACUGUCUUAGAAUGGUGUA - 161 |
Stem-loop(if miRNA) |
    -A           G    G            A         A   CAAACUCGUCUUAGAAUGUCAUACAUUUUAAG UCAU  GGACUGUCUUA AAUG UGUACAUUCUAA ACAGUCUCC ACA                                A ||||  ||||||||||| |||| |||||||||||| ||||||||| ||| AGUG  UCUGGCAGAAU UUAC ACAUGUAAGAUU UGUUAGGGG CCU                                C     CG           A    A            C         U   AUUUAGGUAGAAUCUCACAUACUGUAUUCGGG |
Stem-loop sequence | UCAUAGGACUGUCUUAGAAUGGUGUACAUUCUAAAACAGUCUCCAACACAAACUCGUCUUAGAAUGUCAUACAUUUUAAGACGGGCUUAUGUCAUACACUCUAAGAUGGAUUUAUCCUGGGGAUUGUCUUAGAAUGUACAACAUUAUAAGACGGUCUGCGUGA |
1 | PMID:20122185
"Prediction of novel miRNAs and associated target genes in Glycine max"; Joshi T, Yan Z, Libault M, Jeong DH, Park S, Green PJ, Sherrier DJ, Farmer A, May G, Meyers BC, Xu D, Stacey G; BMC Bioinformatics. 11 Suppl 1:S14(2010). |