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BaseInfo

ncRNA ID	gma-miR1530
Species	Glycine max
Class	miRNA
Genome position	chr10:41232702-41232850 [+]
Reference genome	v1.0
Source	miRBase
Length	21
Mature sequence(if miRNA)	119 - UUUUCACAUAAAUUAAAAUAU - 139
Stem-loop(if miRNA)	GCA       AUAUUA    -AAGU              ---AU    UUUUUUUUAAUUUAUUAUAUUUUUAUAAUU    AAAUAUA      AUAU     UUUAUGUGAAAAUA     UUAA                              U    |||||||      ||||     ||||||||||||||     ||||                              U    UUUGUAU      UAUA     AAAUACACUUUUAU     AUUA                              A -UA       -----G    AAAUU              CUUAA    GAAUAUAUAAUAUAAAAUUUUCUAUUAUAU
Stem-loop sequence	GCAAAAUAUAAUAUUAAUAUAAGUUUUAUGUGAAAAUAAUUUAAUUUUUUUUAAUUUAUUAUAUUUUUAUAAUUUUAUAUAUUAUCUUUUAAAAUAUAAUAUAUAAGAUUAAAUUCUAUUUUCACAUAAAUUAAAAUAUGUAUGUUUAU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_014775497.1	ncRNA:21   UAUAAAAUUAAAUACACUUUU   1   *|||||||*|||||||||||= targets:17   UUAUUUUAUUUUAUGUGAAAG   37 Target Full Sequence	2.5	PREDICTED: Glycine max uncharacterized LOC100818074 (LOC100818074), transcript variant X1, mRNA	uncharacterized LOC100818074(LOC100818074)	coding protein	psRNATarget
NM_001253060.2	ncRNA:21   UAUAAAAUUAAAUACACUUUU   1   |||||||*||||||||*|||| targets:1640   AUAUUUUCAUUUAUGUAAAAA   1660 Target Full Sequence	2.5	Glycine max probable anion transporter 5-like (LOC100812608), mRNA	probable anion transporter 5-like(LOC100812608)	coding protein	psRNATarget
XM_003527348.3	ncRNA:21   UAUAAA-AUUAAAUACACUUUU   1   *|||||-||||||||||||||* targets:2527   CUAUUUGUAAUUUAUGUGAAAC   2548 Target Full Sequence	3.0	PREDICTED: Glycine max uncharacterized LOC100788685 (LOC100788685), mRNA	uncharacterized LOC100788685(LOC100788685)	coding protein	psRNATarget

Reference

1	PMID:18402695 "Novel and nodulation-regulated microRNAs in soybean roots"; Subramanian S, Fu Y, Sunkar R, Barbazuk WB, Zhu JK, Yu O; BMC Genomics. 9:160(2008).