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BaseInfo

ncRNA ID gma-miR167d
Species Glycine max
Class miRNA
Genome position chr10:2640270-2640390 [+]
Reference genome v1.0
Source miRBase
Length 21
Mature sequence(if miRNA) 21 - UGAAGCUGCCAGCAUGAUCUA - 41
Stem-loop(if miRNA) AAGG   -A   --     AA     A   -  -             CUUU       GGGAGC
    GUC  CAA  GGGAA  AGUGA GCU GC CAGCAUGAUCUAG    GGUUAGU      C
    |||  |||  |||||  ||||| ||| || |||||||||||||    |||||||
    CAG  GUU  UCCUU  UCACU CGA CG GUCGUACUGGAUC    CCAAUCG      A
----   AG   UA     CC     C   U  U             ACUC       UGAGAG
Stem-loop sequence AAGGGUCACAAGGGAAAAAGUGAAGCUGCCAGCAUGAUCUAGCUUUGGUUAGUGGGAGCCAGAGAGUGCUAACCCUCACUAGGUCAUGCUGUGCUAGCCUCACUCCUUCCUAUUUGGAGAC

Reference

1 PMID:19084500
"Identification and expression analysis of miRNAs from nitrogen-fixing soybean nodules";
Wang Y, Li P, Cao X, Wang X, Zhang A, Li X;
Biochem Biophys Res Commun. 378:799-803(2009).
2 PMID:21504877
"MicroRNAs in the shoot apical meristem of soybean";
Wong CE, Zhao YT, Wang XJ, Croft L, Wang ZH, Haerizadeh F, Mattick JS, Singh MB, Carroll BJ, Bhalla PL;
J Exp Bot. 62:2495-2506(2011).
3 PMID:21751852
"Transcriptional analysis of soybean root response to Fusarium virguliforme, the causal agent of sudden death syndrome";
Radwan O, Liu Y, Clough SJ;
Mol Plant Microbe Interact. 24:958-972(2011).