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BaseInfo

ncRNA ID gma-miR4393a
Species Glycine max
Class miRNA
Genome position chr10:1370788-1370923 [-]
Reference genome v1.0
Source miRBase
Length 24
Mature sequence(if miRNA) 3 - UGAGAAAAGGACGGCAGAAAAGCC - 26
Stem-loop(if miRNA) C  A   C          C    C           -  AAAAUCACA  GUUUUAAAAUUGAAUCACAA
 UG CUU UCUGCUGUCC UUUC CAGCUGUCCCU UG         CA                    A
 || ||| |||||||||| |||| ||||||||||| ||         ||                    A
 AC GAA AGACGGCAGG AAAG GUUGACAGGGA AC         GU                    U
A  C   A          A    A           C  ----AGCAG  ACAUCAACACAAUUAUAAAU
Stem-loop sequence CUGACUUCUCUGCUGUCCCUUUCCCAGCUGUCCCUUGAAAAUCACACAGUUUUAAAAUUGAAUCACAAAAUUAAAUAUUAACACAACUACAUGGACGACACAGGGACAGUUGAGAAAAGGACGGCAGAAAAGCCAA

Reference

1 PMID:20122185
"Prediction of novel miRNAs and associated target genes in Glycine max";
Joshi T, Yan Z, Libault M, Jeong DH, Park S, Green PJ, Sherrier DJ, Farmer A, May G, Meyers BC, Xu D, Stacey G;
BMC Bioinformatics. 11 Suppl 1:S14(2010).