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BaseInfo

ncRNA ID	gma-miR403b
Species	Glycine max
Class	miRNA
Genome position	chr10:1085223-1085322 [+]
Reference genome	v1.0
Source	miRBase
Length	21
Mature sequence(if miRNA)	64 - UUAGAUUCACGCACAAACUUG - 84
Stem-loop(if miRNA)	C     C    C       C               -  -     UC GAGA AGAGG AAAU GCAGGUU GUGCGUGAAUCUAAU CA AAGUU  U |||| ||||| |||| ||||||| ||||||||||||||| || |||||  C UUCU UUUCC UUUA UGUUCAA CACGCACUUAGAUUG GU UUCAA  A     -     C    C       A               C  C     UU
Stem-loop sequence	GAGACAGAGGCAAAUCGCAGGUUCGUGCGUGAAUCUAAUCAAAGUUUCUCAUUAACUUCUGCGUUAGAUUCACGCACAAACUUGUCAUUUCCCUUUUCUU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_003556633.3	ncRNA:21   GUUCAAACACGCACUUAGAUU   1   **||||||||||||||||||| targets:3115   GUAGUUUGUGCGUGAAUCUAA   3135 Target Full Sequence	0.0	PREDICTED: Glycine max protein argonaute 2-like (LOC100805250), transcript variant X2, mRNA	protein argonaute 2-like(LOC100805250)	coding protein	psRNATarget
XM_006605460.2	ncRNA:21   GUUCAAACACGCACUUAGAUU   1   **||||||||||||||||||| targets:3118   GUAGUUUGUGCGUGAAUCUAA   3138 Target Full Sequence	0.0	PREDICTED: Glycine max protein argonaute 2-like (LOC100805250), transcript variant X1, mRNA	protein argonaute 2-like(LOC100805250)	coding protein	psRNATarget
XM_003547264.3	ncRNA:21   GUUCAAACACGCACUUAGAUU   1   *|||||||||||*|||||||| targets:3340   GAAGUUUGUGCGCGAAUCUAA   3360 Target Full Sequence	1.5	PREDICTED: Glycine max protein argonaute 2-like (LOC100783571), mRNA	protein argonaute 2-like(LOC100783571)	coding protein	psRNATarget
JB171048.1	ncRNA:21   GUUCAAACACGCACUUAGAUU   1   ||=|||*|||||||||||||| targets:11   CAGGUUCGUGCGUGAAUCUAA   31 Target Full Sequence	2.0	Sequence 8712 from Patent EP2559767	NA	coding protein	psRNATarget
LQ242717.1	ncRNA:21   GUUCAAACACGCACUUAGAUU   1   ||=|||*|||||||||||||| targets:11   CAGGUUCGUGCGUGAAUCUAA   31 Target Full Sequence	2.0	Sequence 8712 from Patent EP2985353	NA	coding protein	psRNATarget
HI410587.1	ncRNA:21   GUUCAAACACGCACUUAGAUU   1   ||=|||*|||||||||||||| targets:11   CAGGUUCGUGCGUGAAUCUAA   31 Target Full Sequence	2.0	Sequence 8712 from Patent EP2074227	NA	coding protein	psRNATarget
LQ242716.1	ncRNA:21   GUUCAAACACGCACUUAGAUU   1   ||=|||*|||||||||||||| targets:14   CAGGUUCGUGCGUGAAUCUAA   34 Target Full Sequence	2.0	Sequence 8711 from Patent EP2985353	NA	coding protein	psRNATarget
JB171047.1	ncRNA:21   GUUCAAACACGCACUUAGAUU   1   ||=|||*|||||||||||||| targets:14   CAGGUUCGUGCGUGAAUCUAA   34 Target Full Sequence	2.0	Sequence 8711 from Patent EP2559767	NA	coding protein	psRNATarget
HI410586.1	ncRNA:21   GUUCAAACACGCACUUAGAUU   1   ||=|||*|||||||||||||| targets:14   CAGGUUCGUGCGUGAAUCUAA   34 Target Full Sequence	2.0	Sequence 8711 from Patent EP2074227	NA	coding protein	psRNATarget

Reference

1

PMID:21663675 "Identification of novel soybean microRNAs involved in abiotic and biotic stresses"; Kulcheski FR, de Oliveira LF, Molina LG, Almerao MP, Rodrigues FA, Marcolino J, Barbosa JF, Stolf-Moreira R, Nepomuceno AL, Marcelino-Guimaraes FC, Abdelnoor RV, Nascimento LC, Carazzolle MF, Pereira GA, Margis R; BMC Genomics. 12:307(2011).