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BaseInfo

ncRNA ID gma-miR5031
Species Glycine max
Class miRNA
Genome position chr1:53829660-53829810 [+]
Reference genome v1.0
Source miRBase
Length 21
Mature sequence(if miRNA) 61 - UUAAUGAUUAACAUCUAAUUU - 81
Stem-loop(if miRNA) --------      AUAAA    - GACAUGUAACGAUAAACGUUUAAUAAAAUAGUGAAGGUAGACAAUUAAUGAUUA
        UGUUUA     AUCG U                                                      A
        ||||||     |||| |                                                      C
        AUAAAU     UUAA U                                                      A
ACUAGGAG      -AAAA    A GCUUAAAUUAGGGGUUAAAAAAUAUUAGGACAAUAGGGGUUAGAUCUUUAAUCU
Stem-loop sequence UGUUUAAUAAAAUCGUGACAUGUAACGAUAAACGUUUAAUAAAAUAGUGAAGGUAGACAAUUAAUGAUUAACAUCUAAUUUCUAGAUUGGGGAUAACAGGAUUAUAAAAAAUUGGGGAUUAAAUUCGUAAAUUAAAAUAAAUAGAGGAUCA

Reference

1 PMID:21751852
"Transcriptional analysis of soybean root response to Fusarium virguliforme, the causal agent of sudden death syndrome";
Radwan O, Liu Y, Clough SJ;
Mol Plant Microbe Interact. 24:958-972(2011).