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BaseInfo

ncRNA ID gma-miR1529
Species Glycine max
Class miRNA
Genome position chr1:53829539-53829739 [-]
Reference genome v1.0
Source miRBase
Length 23
Mature sequence(if miRNA) 11 - UUAAAGGAAACAAUUAAUCGUUA - 33
Stem-loop(if miRNA)     AG        C         CUA    CACUAUUUUAUUAAACGUUU       CA    ACGA          CA  A   -       -       AACGUUAA
AAUU  AUGUUAAU AUUAAUUGU   CCUU                    AUCGUUA  UGUC    UUUUAUUAAA  UU AUU UUAUGUA CCUAAUU        C
||||  |||||||| |||||||||   ||||                    |||||||  ||||    ||||||||||  || ||| ||||||| |||||||
UUAA  UGCAAUUG UAAUUAACA   GGAA                    UAGCAAU  ACAG    AAAAUAAUUU  AA UAA AGUGCGU GGAUUAA        U
    CU        C         -AA    ------------------AU       UC    CAUG          AC  C   U       A       AAUAACCU
Stem-loop sequence AAUUAGAUGUUAAUCAUUAAUUGUCUACCUUCACUAUUUUAUUAAACGUUUAUCGUUACAUGUCACGAUUUUAUUAAACAUUAAUUUUAUGUACCUAAUUAACGUUAACUUCCAAUAAAAUUAGGAUGCGUGAUAAUCAACAUUUAAUAAAAGUACGACACUUAACGAUUAAAGGAAACAAUUAAUCGUUAACGUUCAAUU

Reference

1 PMID:18402695
"Novel and nodulation-regulated microRNAs in soybean roots";
Subramanian S, Fu Y, Sunkar R, Barbazuk WB, Zhu JK, Yu O;
BMC Genomics. 9:160(2008).