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BaseInfo

ncRNA ID gma-miR171d
Species Glycine max
Class miRNA
Genome position chr1:49100259-49100368 [-]
Reference genome v1.0
Source miRBase
Length 21
Mature sequence(if miRNA) 10 - UGAUUGAGUCGUGUCAAUAUC - 30
Stem-loop(if miRNA) -   CAU  U C       U  GU   C     ----  C     ---       UCAC
 AGC   UG G UAUUGGC CG  UCA UCAGA    CA AAAAC   AACCAUA    A
 |||   || | ||||||| ||  ||| |||||    || |||||   |||||||
 UCG   AC C AUAACUG GC  AGU AGUUU    GU UUUUG   UUGGUGU    A
A   -UC  U U       U  UG   U     CUAA  -     CUU       UUAC
Stem-loop sequence AGCCAUUGUGCUAUUGGCUCGGUUCACUCAGACACAAAACAACCAUAUCACAACAUUUGUGGUUUUCGUUUUUGAAUCUUUGAUUGAGUCGUGUCAAUAUCUCACUGCUA

Reference

1 PMID:21504877
"MicroRNAs in the shoot apical meristem of soybean";
Wong CE, Zhao YT, Wang XJ, Croft L, Wang ZH, Haerizadeh F, Mattick JS, Singh MB, Carroll BJ, Bhalla PL;
J Exp Bot. 62:2495-2506(2011).