| ncRNA ID | gma-miR1515a |
| Species | Glycine max |
| Class | miRNA |
| Genome position | chr1:48531381-48531525 [+] |
| Reference genome | v1.0 |
| Source | miRBase |
| Length | 22 |
| Mature sequence(if miRNA) | 11 - UCAUUUUGCGUGCAAUGAUCUG - 32 |
| Stem-loop(if miRNA) |
U GUU CAA U C ---AU - CCCUGCACCGUUAUUUCGUUGUGGC AAAU CAUCAUUUUGCGUG UGAUC GAA C UUUG AUU A |||| |||||||||||||| ||||| ||| | |||| ||| UUUA GUAGUAAAACGCAC ACUAG CUU G GGUG UUG U U ACU -UC U U CAAAA U UAUUUUAGUUACCGAAUUAAACUAA |
| Stem-loop sequence | UAAAUGUUCAUCAUUUUGCGUGCAAUGAUCUGAACCAUUUUGAUUCCCUGCACCGUUAUUUCGUUGUGGCAUAAUCAAAUUAAGCCAUUGAUUUUAUGUUUGUGGAAAACGUUUCUGAUCACUCACGCAAAAUGAUGUCAAUUUU |
| Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| XM_014761864.1 |
|
1.5 | PREDICTED: Glycine max endoribonuclease Dicer homolog 2-like (LOC100792448), transcript variant X4, mRNA | endoribonuclease Dicer homolog 2-like(LOC100792448) | coding protein | psRNATarget | |||||||||
| XM_006586783.2 |
|
1.5 | PREDICTED: Glycine max endoribonuclease Dicer homolog 2-like (LOC100792448), transcript variant X2, mRNA | endoribonuclease Dicer homolog 2-like(LOC100792448) | coding protein | psRNATarget | |||||||||
| XM_003534726.3 |
|
1.5 | PREDICTED: Glycine max endoribonuclease Dicer homolog 2-like (LOC100792448), transcript variant X1, mRNA | endoribonuclease Dicer homolog 2-like(LOC100792448) | coding protein | psRNATarget | |||||||||
| XM_006586784.2 |
|
1.5 | PREDICTED: Glycine max endoribonuclease Dicer homolog 2-like (LOC100792448), transcript variant X3, mRNA | endoribonuclease Dicer homolog 2-like(LOC100792448) | coding protein | psRNATarget |
| 1 | PMID:18402695
"Novel and nodulation-regulated microRNAs in soybean roots"; Subramanian S, Fu Y, Sunkar R, Barbazuk WB, Zhu JK, Yu O; BMC Genomics. 9:160(2008). |