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BaseInfo

ncRNA ID gma-miR4393b
Species Glycine max
Class miRNA
Genome position chr1:48194560-48194671 [-]
Reference genome v1.0
Source miRBase
Length 24
Mature sequence(if miRNA) 3 - UUGAAAAGGGACAGCAGAGAAGCC - 26
Stem-loop(if miRNA) U  A          A              G    CA                  A
 UG CUUCUCUGCU UCCCUUUUCAAGUU UCCC  UGCUUUCCCUUCAAAACG C
 || |||||||||| |||||||||||||| ||||  ||||||||||||||||||
 AC GAAGAGACGA AGGGAAAAGUUCGA AGGG  ACGAAAGGGAAGUUUUGC A
A  C          C              A    AC                  U
Stem-loop sequence UUGACUUCUCUGCUAUCCCUUUUCAAGUUGUCCCCAUGCUUUCCCUUCAAAACGACAUCGUUUUGAAGGGAAAGCACAGGGAAAGCUUGAAAAGGGACAGCAGAGAAGCCAA

Reference

1 PMID:20122185
"Prediction of novel miRNAs and associated target genes in Glycine max";
Joshi T, Yan Z, Libault M, Jeong DH, Park S, Green PJ, Sherrier DJ, Farmer A, May G, Meyers BC, Xu D, Stacey G;
BMC Bioinformatics. 11 Suppl 1:S14(2010).