| ncRNA ID | gma-miR168b |
| Species | Glycine max |
| Class | miRNA |
| Genome position | chr1:48070311-48070420 [-] |
| Reference genome | v1.0 |
| Source | miRBase |
| Length | 19 |
| Mature sequence(if miRNA) | 81 - UCGCUUGGUGCAGGUCGGG - 99 |
| Stem-loop(if miRNA) |
UA C U A - G --AA GA CGGUCUC AUUCG UUGGUGCAGG CGGGA CCGGUUU UCGC CGG UG G ||||||| ||||| |||||||||| ||||| ||||||| |||| ||| || GCCGGAG UAAGU AACUACGUUC GCCCU GGUUAAG GGCG GCC GC G GC C C A C - GCUG AA |
| Stem-loop sequence | CGGUCUCUAAUUCGCUUGGUGCAGGUCGGGAACCGGUUUUCGCGCGGAAUGGAGGAACGGUCGCCGGCGGCGAAUUGGAUCCCGCCUUGCAUCAACUGAAUCGGAGGCCG |
| Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| XM_003534036.3 |
|
2.5 | PREDICTED: Glycine max protein argonaute 1 (LOC100780375), transcript variant X1, mRNA | protein argonaute 1(LOC100780375) | coding protein | psRNATarget | |||||||||
| XM_003548263.3 |
|
2.5 | PREDICTED: Glycine max protein argonaute 1-like (LOC100778754), mRNA | protein argonaute 1-like(LOC100778754) | coding protein | psRNATarget | |||||||||
| AK286252.1 |
|
2.5 | Glycine max cDNA, clone: GMFL01-24-N15 | NA | coding protein | psRNATarget |
| 1 | PMID:21504877
"MicroRNAs in the shoot apical meristem of soybean"; Wong CE, Zhao YT, Wang XJ, Croft L, Wang ZH, Haerizadeh F, Mattick JS, Singh MB, Carroll BJ, Bhalla PL; J Exp Bot. 62:2495-2506(2011). |
| 2 | PMID:21663675
"Identification of novel soybean microRNAs involved in abiotic and biotic stresses"; Kulcheski FR, de Oliveira LF, Molina LG, Almerao MP, Rodrigues FA, Marcolino J, Barbosa JF, Stolf-Moreira R, Nepomuceno AL, Marcelino-Guimaraes FC, Abdelnoor RV, Nascimento LC, Carazzolle MF, Pereira GA, Margis R; BMC Genomics. 12:307(2011). |
| 3 | PMID:24475082
"Systems and evolutionary characterization of microRNAs and their underlying regulatory networks in soybean cotyledons"; Goettel W, Liu Z, Xia J, Zhang W, Zhao PX, An YQ; PLoS One. 9:e86153(2014). |