ncRNA ID | gma-miR4359a |
Species | Glycine max |
Class | miRNA |
Genome position | chr1:41468739-41468850 [-] |
Reference genome | v1.0 |
Source | miRBase |
Length | 24 |
Mature sequence(if miRNA) | 61 - AACGAAGUGACUCUAACAUCGGUU - 84 |
Stem-loop(if miRNA) |
             A        A           G     C             C UAACAUCGGUUUU UGAAAAUC AUGUUAACGAA UGACU UAACAUCGGUUUU A ||||||||||||| |||||||| ||||||||||| ||||| ||||||||||||| AUUGUAGCCAAAA ACUUUUAG UACAAUUGCUU GCUGA AUUGUAGCUAAAA A              G        C           A     U             G |
Stem-loop sequence | UAACAUCGGUUUUAUGAAAAUCAAUGUUAACGAAGUGACUCUAACAUCGGUUUUCAAGAAAAUCGAUGUUAUAGUCGAUUCGUUAACAUCGAUUUUCAGAAAACCGAUGUUA |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_014772528.1 |
|
2.5 | PREDICTED: Glycine max lysine-specific demethylase JMJ25-like (LOC100802580), mRNA | lysine-specific demethylase JMJ25-like(LOC100802580) | coding protein | psRNATarget |
1 | PMID:20122185
"Prediction of novel miRNAs and associated target genes in Glycine max"; Joshi T, Yan Z, Libault M, Jeong DH, Park S, Green PJ, Sherrier DJ, Farmer A, May G, Meyers BC, Xu D, Stacey G; BMC Bioinformatics. 11 Suppl 1:S14(2010). |