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BaseInfo

ncRNA ID gma-miR4359a
Species Glycine max
Class miRNA
Genome position chr1:41468739-41468850 [-]
Reference genome v1.0
Source miRBase
Length 24
Mature sequence(if miRNA) 61 - AACGAAGUGACUCUAACAUCGGUU - 84
Stem-loop(if miRNA)              A        A           G     C             C
UAACAUCGGUUUU UGAAAAUC AUGUUAACGAA UGACU UAACAUCGGUUUU A
||||||||||||| |||||||| ||||||||||| ||||| |||||||||||||
AUUGUAGCCAAAA ACUUUUAG UACAAUUGCUU GCUGA AUUGUAGCUAAAA A
             G        C           A     U             G
Stem-loop sequence UAACAUCGGUUUUAUGAAAAUCAAUGUUAACGAAGUGACUCUAACAUCGGUUUUCAAGAAAAUCGAUGUUAUAGUCGAUUCGUUAACAUCGAUUUUCAGAAAACCGAUGUUA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_014772528.1
ncRNA:24   UUGGCUACAAUCUCAGUGAAGCAA   1
  **==|||||*|||||||||||*||
targets:3789   CUUUGAUGUCAGAGUCACUUCCUU   3812

2.5 PREDICTED: Glycine max lysine-specific demethylase JMJ25-like (LOC100802580), mRNA lysine-specific demethylase JMJ25-like(LOC100802580) coding protein psRNATarget

Reference

1 PMID:20122185
"Prediction of novel miRNAs and associated target genes in Glycine max";
Joshi T, Yan Z, Libault M, Jeong DH, Park S, Green PJ, Sherrier DJ, Farmer A, May G, Meyers BC, Xu D, Stacey G;
BMC Bioinformatics. 11 Suppl 1:S14(2010).