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BaseInfo

ncRNA ID gma-miR393b
Species Glycine max
Class miRNA
Genome position chr1:41428832-41428947 [-]
Reference genome v1.0
Source miRBase
Length 21
Mature sequence(if miRNA) 11 - UUUGGGAUCAUGCUAUCCCUU - 31
Stem-loop(if miRNA) A      GCA           CA   U         UCCA   UUCAAUGUUCUUCUCUCU
 GAGGAG   UCCAAAGGGAU  CAU GAUCCCAAA    AGC                  U
 ||||||   |||||||||||  ||| |||||||||    |||
 CUCUUC   AGGUUUCCCUA  GUA CUAGGGUUU    UUU                  U
-      ---           UC   -         ---A   UAAUUAUAAAACUCACUC
Stem-loop sequence AGAGGAGGCAUCCAAAGGGAUCACAUUGAUCCCAAAUCCAAGCUUCAAUGUUCUUCUCUCUUUCUCACUCAAAAUAUUAAUUUUAUUUGGGAUCAUGCUAUCCCUUUGGACUUCUC

Reference

1 PMID:22156213
"MicroRNAs as master regulators of the plant NB-LRR defense gene family via the production of phased, trans-acting siRNAs";
Zhai J, Jeong DH, De Paoli E, Park S, Rosen BD, Li Y, Gonzalez AJ, Yan Z, Kitto SL, Grusak MA, Jackson SA, Stacey G, Cook DR, Green PJ, Sherrier DJ, Meyers BC;
Genes Dev. 25:2540-2553(2011).