ncRNA ID | gma-miR4374a |
Species | Glycine max |
Class | miRNA |
Genome position | chr1:41170524-41170690 [-] |
Reference genome | v1.0 |
Source | miRBase |
Length | 22 |
Mature sequence(if miRNA) | 12 - UAAGACGGUCGUGAUGUCAGCA - 33 |
Stem-loop(if miRNA) |
-         U              A           GU        U     A   C        ACAAC     A   AGC  UCAAAGACG UGUUGACAUCACGA CGUCUUAGAAA  CAGGCUUC AAGAC GUG UGACGUCG     GUCUU GAA   C  ||||||||| |||||||||||||| |||||||||||  |||||||| ||||| ||| ||||||||     ||||| |||  AGUUUCUGC ACGACUGUAGUGCU GCAGAAUCUUU  GUCCGAAG UUCUG CAC ACUGCAGU     CAGAA CUU   A A         C              G           UG        U     C   A        GCCGA     A   CCA |
Stem-loop sequence | UCAAAGACGUUGUUGACAUCACGAACGUCUUAGAAAGUCAGGCUUCUAAGACAGUGCUGACGUCGACAACGUCUUAGAAAGCCAACCUUCAAAGACAGCCGUGACGUCAACACCGUCUUUGAAGCCUGGUUUUCUAAGACGGUCGUGAUGUCAGCACCGUCUUUGAA |
1 | PMID:20122185
"Prediction of novel miRNAs and associated target genes in Glycine max"; Joshi T, Yan Z, Libault M, Jeong DH, Park S, Green PJ, Sherrier DJ, Farmer A, May G, Meyers BC, Xu D, Stacey G; BMC Bioinformatics. 11 Suppl 1:S14(2010). |