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BaseInfo

ncRNA ID gma-miR4406
Species Glycine max
Class miRNA
Genome position chr1:39315552-39315675 [+]
Reference genome v1.0
Source miRBase
Length 24
Mature sequence(if miRNA) 9 - AUUGAUUCUGAGAGAACCGGUGUA - 32
Stem-loop(if miRNA) CAA         A        GA              A    C            - - UUC
   UCUAUAUUG UUCUGAGA  ACCGGUGUAGAAUG UAAU AUUCUAAGACGG C C   G
   ||||||||| ||||||||  |||||||||||||| |||| |||||||||||| | |
   AGAUGUAGC AAGACUCU  UGGCUACAUCUUAC AUUG UAAGAUUUUGCC G G   A
GUA         C        GC              G    C            A U UAC
Stem-loop sequence CAAUCUAUAUUGAUUCUGAGAGAACCGGUGUAGAAUGAUAAUCAUUCUAAGACGGCCUUCGACAUGUGACCGUUUUAGAAUCGUUAGCAUUCUACAUCGGUCGUCUCAGAACCGAUGUAGAAUG

Reference

1 PMID:20122185
"Prediction of novel miRNAs and associated target genes in Glycine max";
Joshi T, Yan Z, Libault M, Jeong DH, Park S, Green PJ, Sherrier DJ, Farmer A, May G, Meyers BC, Xu D, Stacey G;
BMC Bioinformatics. 11 Suppl 1:S14(2010).
2 PMID:24475082
"Systems and evolutionary characterization of microRNAs and their underlying regulatory networks in soybean cotyledons";
Goettel W, Liu Z, Xia J, Zhang W, Zhao PX, An YQ;
PLoS One. 9:e86153(2014).