ncRNA ID | gma-miR4406 |
Species | Glycine max |
Class | miRNA |
Genome position | chr1:39315552-39315675 [+] |
Reference genome | v1.0 |
Source | miRBase |
Length | 24 |
Mature sequence(if miRNA) | 9 - AUUGAUUCUGAGAGAACCGGUGUA - 32 |
Stem-loop(if miRNA) |
CAA         A        GA              A    C            - - UUC    UCUAUAUUG UUCUGAGA  ACCGGUGUAGAAUG UAAU AUUCUAAGACGG C C   G    ||||||||| ||||||||  |||||||||||||| |||| |||||||||||| | |    AGAUGUAGC AAGACUCU  UGGCUACAUCUUAC AUUG UAAGAUUUUGCC G G   A GUA         C        GC              G    C            A U UAC |
Stem-loop sequence | CAAUCUAUAUUGAUUCUGAGAGAACCGGUGUAGAAUGAUAAUCAUUCUAAGACGGCCUUCGACAUGUGACCGUUUUAGAAUCGUUAGCAUUCUACAUCGGUCGUCUCAGAACCGAUGUAGAAUG |
1 | PMID:20122185
"Prediction of novel miRNAs and associated target genes in Glycine max"; Joshi T, Yan Z, Libault M, Jeong DH, Park S, Green PJ, Sherrier DJ, Farmer A, May G, Meyers BC, Xu D, Stacey G; BMC Bioinformatics. 11 Suppl 1:S14(2010). |
2 | PMID:24475082
"Systems and evolutionary characterization of microRNAs and their underlying regulatory networks in soybean cotyledons"; Goettel W, Liu Z, Xia J, Zhang W, Zhao PX, An YQ; PLoS One. 9:e86153(2014). |