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BaseInfo

ncRNA ID gma-miR4380a
Species Glycine max
Class miRNA
Genome position chr1:38074328-38074480 [-]
Reference genome v1.0
Source miRBase
Length 24
Mature sequence(if miRNA) 3 - CGGAUUGUUGAUCCGUAUGUGCAU - 26
Stem-loop(if miRNA)              A               A GU    C                  A    UCCGUAUGGGUCAUA
GUAUGCACAUACG AUUAGCAAUCUGUAU G  CAUG GGAUUGUCAAUCUGUAUG GCAA               C
||||||||||||| ||||||||||||||| |  |||| |||||||||||||||||| ||||               G
CAUACGUGUAUGC UAGUUGUUAGGCAUG C  GUAU CCUAACGGUUAGGCAUAC CUAG               G
             C               - UG    A                  -    UAUGUCUAGUCGUUA
Stem-loop sequence GUAUGCACAUACGAAUUAGCAAUCUGUAUAGGUCAUGCGGAUUGUCAAUCUGUAUGAGCAAUCCGUAUGGGUCAUACGGAUUGCUGAUCUGUAUGAUCCAUACGGAUUGGCAAUCCAUAUGGUCGUACGGAUUGUUGAUCCGUAUGUGCAUAC

Reference

1 PMID:20122185
"Prediction of novel miRNAs and associated target genes in Glycine max";
Joshi T, Yan Z, Libault M, Jeong DH, Park S, Green PJ, Sherrier DJ, Farmer A, May G, Meyers BC, Xu D, Stacey G;
BMC Bioinformatics. 11 Suppl 1:S14(2010).