ncRNA ID | gma-miR4380a |
Species | Glycine max |
Class | miRNA |
Genome position | chr1:38074328-38074480 [-] |
Reference genome | v1.0 |
Source | miRBase |
Length | 24 |
Mature sequence(if miRNA) | 3 - CGGAUUGUUGAUCCGUAUGUGCAU - 26 |
Stem-loop(if miRNA) |
             A               A GU    C                  A    UCCGUAUGGGUCAUA GUAUGCACAUACG AUUAGCAAUCUGUAU G  CAUG GGAUUGUCAAUCUGUAUG GCAA               C ||||||||||||| ||||||||||||||| |  |||| |||||||||||||||||| ||||               G CAUACGUGUAUGC UAGUUGUUAGGCAUG C  GUAU CCUAACGGUUAGGCAUAC CUAG               G              C               - UG    A                  -    UAUGUCUAGUCGUUA |
Stem-loop sequence | GUAUGCACAUACGAAUUAGCAAUCUGUAUAGGUCAUGCGGAUUGUCAAUCUGUAUGAGCAAUCCGUAUGGGUCAUACGGAUUGCUGAUCUGUAUGAUCCAUACGGAUUGGCAAUCCAUAUGGUCGUACGGAUUGUUGAUCCGUAUGUGCAUAC |
1 | PMID:20122185
"Prediction of novel miRNAs and associated target genes in Glycine max"; Joshi T, Yan Z, Libault M, Jeong DH, Park S, Green PJ, Sherrier DJ, Farmer A, May G, Meyers BC, Xu D, Stacey G; BMC Bioinformatics. 11 Suppl 1:S14(2010). |