| ncRNA ID | ath-miR824-3p |
| Species | Arabidopsis thaliana |
| Class | miRNA |
| Genome position | chr4:12625094-12625782 [+] |
| Reference genome | TAIR10 |
| Source | miRBase |
| Length | 21 |
| Mature sequence(if miRNA) | 628 - CCUUCUCAUCGAUGGUCUAGA - 648 |
| Stem-loop(if miRNA) |
U U A ----------- UG U U UUUUGUUUAC - C - G A UAAGA --AU - ---A -----------AACAUA GUUCGACAUACCAUACUACCCUUUUUAAAACUAUCCUAUAUGUUUGAUGCUAGCAUAGCGUAAUUUUGUGUUCUCAUGGUGCAGCAGGGUUAGUUUAUUGUGUACCUCUAGAUAUAUAUUCUCUUGCUGCGUAGGGUUCCCAAGCUGCCAAAAACUUUUAAAAAUUAGUGAUCUGUUCCCCAAACCCCCAUUCAAUAAGAAAGG AUCACCAUU GU CUU GAGU UCUC CAUGUCUAGACCAUU GUGAGAAGGGAGU ACCAA UA C CCCCA UCUCUAA UUUG AGUAUU GCU C AUUAAGG GCUA U ||||||||| || ||| |||| |||| ||||||||||||||| ||||||||||||| ||||| || | ||||| ||||||| |||| |||||| ||| | ||||||| |||| UAGUGGUAA CA GAA CUCA GGAG GUGUAGAUCUGGUAG UACUCUUCCCUUA UGGUU GU G GGGGU AGGGGUU AAAU UUAUAA CGA G UGGUUCC CUAA C - - A AUGGAGGUACU GU C C -------UAU U A A G A CUAUG GAAU U GUAC ACAUUUACUAAAAUAUA AACUCUUAGCCGAACCUGAUCAAGCUUAUGUUUAUUUUUUUCAAUACAUACGUUGUAGACCUUUUCAGUACUUACUUGAAUUAGCUGAAUGAAGAUAUGGAUUGAAGACUUCCUAGUCUGAAAGUAUCCCAUUGAUUAAUUGAUUUUGUCAUUUGGGUUUCUUCGUUCCUGUCGAGAUUAUCGACACUGACACUCGAUGUCCAU |
| Stem-loop sequence | UAUCACCAUUUGUACUUGAGUUGUCUCUCAUGUCUAGACCAUUUGUGAGAAGGGAGUUUUUGUUUACACCAAUACCCCCCAGUCUCUAAAUUUGUAAGAAGUAUUAUGCUCAAUUAAGGAACAUAGCUAGUUCGACAUACCAUACUACCCUUUUUAAAACUAUCCUAUAUGUUUGAUGCUAGCAUAGCGUAAUUUUGUGUUCUCAUGGUGCAGCAGGGUUAGUUUAUUGUGUACCUCUAGAUAUAUAUUCUCUUGCUGCGUAGGGUUCCCAAGCUGCCAAAAACUUUUAAAAAUUAGUGAUCUGUUCCCCAAACCCCCAUUCAAUAAGAAAGGUCUACCUGUAGCUCACAGUCACAGCUAUUAGAGCUGUCCUUGCUUCUUUGGGUUUACUGUUUUAGUUAAUUAGUUACCCUAUGAAAGUCUGAUCCUUCAGAAGUUAGGUAUAGAAGUAAGUCGAUUAAGUUCAUUCAUGACUUUUCCAGAUGUUGCAUACAUAACUUUUUUUAUUUGUAUUCGAACUAGUCCAAGCCGAUUCUCAAAAUCAUAUAAAAUCAUUUACACCUUGGUCAUGGUAGCUAAGAAUAUUGUAUCUAAAAUUGGGGAGUGGGGAGAUGUUUGGUUAUAUUCCCUUCUCAUCGAUGGUCUAGAUGUGCGAGGUGACUCUCAUGGAGGUAAAGAACAAUGGUGAU |
| 1 | PMID:17182867
"A diverse and evolutionarily fluid set of microRNAs in Arabidopsis thaliana"; Rajagopalan R, Vaucheret H, Trejo J, Bartel DP; Genes Dev. 20:3407-3425(2006). |
| 2 | PMID:17299599
"High-throughput sequencing of Arabidopsis microRNAs: evidence for frequent birth and death of MIRNA genes"; Fahlgren N, Howell MD, Kasschau KD, Chapman EJ, Sullivan CM, Cumbie JS, Givan SA, Law TF, Grant SR, Dangl JL, Carrington JC; PLoS One. 2:e219(2007). |
| 3 | PMID:17704216
"MicroRNA-mediated regulation of stomatal development in Arabidopsis"; Kutter C, Schob H, Stadler M, Meins F Jr, Si-Ammour A; Plant Cell. 19:2417-2429(2007). |
| 4 | PMID:19815687
"Hypoxia-responsive microRNAs and trans-acting small interfering RNAs in Arabidopsis"; Moldovan D, Spriggs A, Yang J, Pogson BJ, Dennis ES, Wilson IW; J Exp Bot. 61:165-177(2010). |