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BaseInfo

ncRNA ID gma-miR2107
Species Glycine max
Class miRNA
Genome position chr1:10270157-10270210 [-]
Reference genome v1.0
Source miRBase
Length 21
Mature sequence(if miRNA) 31 - CAAACCUCCGUAGCCUGUAUC - 51
Stem-loop(if miRNA) -AUCCA     CC    -CC  U   A
      AACCU  GUAG   UG AUC A
      |||||  ||||   || |||
      UUGGA  CAUC   AC UAG A
CUACAC     CU    CUC  C   C
Stem-loop sequence AUCCAAACCUCCGUAGCCUGUAUCAAACGAUCCACUCCUACUCAGGUUCACAUC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_014773885.1
ncRNA:21   CUAUGUCCGAUGCCUCCAAAC   1
  ||||||||||||||||||||*
targets:543   GAUACAGGCUACGGAGGUUUU   563

1.0 PREDICTED: Glycine max uncharacterized LOC100798836 (LOC100798836), transcript variant X2, mRNA uncharacterized LOC100798836(LOC100798836) coding protein psRNATarget

Reference

1 PMID:19084500
"Identification and expression analysis of miRNAs from nitrogen-fixing soybean nodules";
Wang Y, Li P, Cao X, Wang X, Zhang A, Li X;
Biochem Biophys Res Commun. 378:799-803(2009).