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BaseInfo

ncRNA ID gma-miR398a
Species Glycine max
Class miRNA
Genome position chr1:7195760-7195875 [-]
Reference genome v1.0
Source miRBase
Length 21
Mature sequence(if miRNA) 20 - UGUGUUCUCAGGUCACCCCUU - 40
Stem-loop(if miRNA) ---------------        A    A               CU    UG A  GC       U
               CUCGGAGG GUGA UCUGAGAACACAAGG  GGUU  C CU  UAUAUCA C
               |||||||| |||| |||||||||||||||  ||||  | ||  ||||||| U
               GAGUUUCC CACU GGACUCUUGUGUUUC  UUAA  G GA  AUAUGGU A
UACAGUUGUCCAACC        C    -               AU    GU -  --       U
Stem-loop sequence CUCGGAGGAGUGAAUCUGAGAACACAAGGCUGGUUUGCACUGCUAUAUCAUCUAUUGGUAUAAGGUGAAUUUACUUUGUGUUCUCAGGUCACCCCUUUGAGCCAACCUGUUGACAU

Reference

1 PMID:21571671
"Stars and symbiosis: microRNA- and microRNA*-mediated transcript cleavage involved in arbuscular mycorrhizal symbiosis";
Devers EA, Branscheid A, May P, Krajinski F;
Plant Physiol. 156:1990-2010(2011).