ncRNA ID | gma-miR398a |
Species | Glycine max |
Class | miRNA |
Genome position | chr1:7195760-7195875 [-] |
Reference genome | v1.0 |
Source | miRBase |
Length | 21 |
Mature sequence(if miRNA) | 20 - UGUGUUCUCAGGUCACCCCUU - 40 |
Stem-loop(if miRNA) |
---------------        A    A               CU    UG A  GC       U                CUCGGAGG GUGA UCUGAGAACACAAGG  GGUU  C CU  UAUAUCA C                |||||||| |||| |||||||||||||||  ||||  | ||  ||||||| U                GAGUUUCC CACU GGACUCUUGUGUUUC  UUAA  G GA  AUAUGGU A UACAGUUGUCCAACC        C    -               AU    GU -  --       U |
Stem-loop sequence | CUCGGAGGAGUGAAUCUGAGAACACAAGGCUGGUUUGCACUGCUAUAUCAUCUAUUGGUAUAAGGUGAAUUUACUUUGUGUUCUCAGGUCACCCCUUUGAGCCAACCUGUUGACAU |
1 | PMID:21571671
"Stars and symbiosis: microRNA- and microRNA*-mediated transcript cleavage involved in arbuscular mycorrhizal symbiosis"; Devers EA, Branscheid A, May P, Krajinski F; Plant Physiol. 156:1990-2010(2011). |