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BaseInfo

ncRNA ID	gma-miR395h
Species	Glycine max
Class	miRNA
Genome position	chr1:4792375-4792487 [-]
Reference genome	v1.0
Source	miRBase
Length	21
Mature sequence(if miRNA)	14 - AUGAAGUGUUUGGGAGAACUC - 34
Stem-loop(if miRNA)	CUGU   C  UC   U       CU UG          -GU    -    ---   UAUU     UGG UG  UCC GGAGUUC  C  AACGCUUCAU   GAGG GGCU   AGC    A     ||| ||  ||| |||||||  |  ||||||||||   |||| ||||   |||     ACC AC  GGG UCUCAAG  G  UUGUGAAGUA   UUCU CCGA   UUG    U ----   A  UC   U       AG GU          ACU    U    AUA   CAAA
Stem-loop sequence	CUGUUGGCUGUCUCCUGGAGUUCCUCUGAACGCUUCAUGUGAGGGGCUAGCUAUUAUAAACGUUAUAAGCCUUCUUUCAAUGAAGUGUUUGGGAGAACUCUUGGGCUCAACCA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_003531315.2	ncRNA:21   CUCAAGAGGGUUUGUGAAGUA   1   ||||||||||||||||||||* targets:145   GAGUUCUCCCAAACACUUCAA   165 Target Full Sequence	1.0	PREDICTED: Glycine max sulfate transporter 2.1-like (LOC100775538), mRNA	sulfate transporter 2.1-like(LOC100775538)	coding protein	psRNATarget
XM_014770651.1	ncRNA:21   CUCAAGAGGGUUUGUGAAGUA   1   *|||||||||||||||||||* targets:215   AAGUUCUCCCAAACACUUCAA   235 Target Full Sequence	1.0	PREDICTED: Glycine max sulfate transporter 2.1-like (LOC100814993), mRNA	sulfate transporter 2.1-like(LOC100814993)	coding protein	psRNATarget
XM_003552772.3	ncRNA:21   CUCAAGAGGGUUUGUGAAGUA   1   *|||||||||||||||||||* targets:108   AAGUUCUCCCAAACACUUCAA   128 Target Full Sequence	1.0	PREDICTED: Glycine max sulfate transporter 2.1-like (LOC100817831), mRNA	sulfate transporter 2.1-like(LOC100817831)	coding protein	psRNATarget
XM_003538469.3	ncRNA:21   CUCAAGAGGGUUUGUGAAGUA   1   *|||||||||||||||||||* targets:148   AAGUUCUCCCAAACACUUCAA   168 Target Full Sequence	1.0	PREDICTED: Glycine max sulfate transporter 2.1-like (LOC100781327), mRNA	sulfate transporter 2.1-like(LOC100781327)	coding protein	psRNATarget
XM_014767214.1	ncRNA:21   CUCAAGAGGGUUUGUGAAGUA   1   *|||||*|||||||||||||* targets:515   AAGUUCACCCAAACACUUCAA   535 Target Full Sequence	2.0	PREDICTED: Glycine max low affinity sulfate transporter 3-like (LOC100776591), transcript variant X3, mRNA	low affinity sulfate transporter 3-like(LOC100776591)	coding protein	psRNATarget
XM_006596268.2	ncRNA:21   CUCAAGAGGGUUUGUGAAGUA   1   *|||||*|||||||||||||* targets:516   AAGUUCACCCAAACACUUCAA   536 Target Full Sequence	2.0	PREDICTED: Glycine max low affinity sulfate transporter 3-like (LOC100776591), transcript variant X2, mRNA	low affinity sulfate transporter 3-like(LOC100776591)	coding protein	psRNATarget
XM_003543724.3	ncRNA:21   CUCAAGAGGGUUUGUGAAGUA   1   *|||||*|||||||||||||* targets:330   AAGUUCACCCAAACACUUCAG   350 Target Full Sequence	2.0	PREDICTED: Glycine max low affinity sulfate transporter 3-like (LOC100798723), mRNA	low affinity sulfate transporter 3-like(LOC100798723)	coding protein	psRNATarget
XM_006596269.2	ncRNA:21   CUCAAGAGGGUUUGUGAAGUA   1   *|||||*|||||||||||||* targets:519   AAGUUCACCCAAACACUUCAA   539 Target Full Sequence	2.0	PREDICTED: Glycine max low affinity sulfate transporter 3-like (LOC100776591), transcript variant X4, mRNA	low affinity sulfate transporter 3-like(LOC100776591)	coding protein	psRNATarget
XM_003544137.3	ncRNA:21   CUCAAGAGGGUUUGUGAAGUA   1   *|||||*|||||||||||||* targets:507   AAGUUCACCCAAACACUUCAA   527 Target Full Sequence	2.0	PREDICTED: Glycine max low affinity sulfate transporter 3-like (LOC100776591), transcript variant X1, mRNA	low affinity sulfate transporter 3-like(LOC100776591)	coding protein	psRNATarget
XM_003538344.3	ncRNA:21   CUCAAGAGGGUUUGUGAAGUA   1   ***|||||=|||||||||||| targets:242   UUUUUCUCUCAAACACUUCAU   262 Target Full Sequence	2.5	PREDICTED: Glycine max glucan endo-1,3-beta-glucosidase 2-like (LOC100804152), mRNA	glucan endo-1,3-beta-glucosidase 2-like(LOC100804152)	coding protein	psRNATarget
XM_003526548.3	ncRNA:21   CUCAAGAGGGUUUGUGAAGUA   1   ||||||**||||||||||||* targets:259   GAGUUCAACCAAACACUUCAA   279 Target Full Sequence	3.0	PREDICTED: Glycine max low affinity sulfate transporter 3-like (LOC100805269), mRNA	low affinity sulfate transporter 3-like(LOC100805269)	coding protein	psRNATarget

Reference

1	PMID:22559273 "Genome organization and characteristics of soybean microRNAs"; Turner M, Yu O, Subramanian S; BMC Genomics. 13:169(2012).