ncRNA ID | gma-miR4367 |
Species | Glycine max |
Class | miRNA |
Genome position | chr1:2410094-2410318 [+] |
Reference genome | v1.0 |
Source | miRBase |
Length | 22 |
Mature sequence(if miRNA) | 149 - CUGAACCCUAGCGAAGUAAAUC - 170 |
Stem-loop(if miRNA) |
             A     A  CC                 A                       A             C              ------CU     CACU   GG CAAUUUCCAUCAA ACAAU CU  CCUAAAACCUAGAACAA AUAUGAUAUAAUUGAUUUACUUC CUAGGGUUCAGGA AAUAUUCAAUCAUG        UGGCU    GCA  A ||||||||||||| ||||| ||  ||||||||||||||||| ||||||||||||||||||||||| ||||||||||||| ||||||||||||||        |||||    ||| GUUAAAGGUAGUU UGUUA GA  GGAUUUUGGAUCUUGUU UAUACUAUGUUAACUAAAUGAAG GAUCCCAAGUCCU UUAUAAGUUAGUAC        ACUGA    CGU  C              C     C  AA                 C                       C             A              ACUCUCUU     ---U   AA |
Stem-loop sequence | CAAUUUCCAUCAAAACAAUACUCCCCUAAAACCUAGAACAAAAUAUGAUAUAAUUGAUUUACUUCACUAGGGUUCAGGACAAUAUUCAAUCAUGCUUGGCUCACUGCAGGACAAUGCUAGUCAUUCUCUCACAUGAUUGAAUAUUAUCCUGAACCCUAGCGAAGUAAAUCAAUUGUAUCAUAUCUUGUUCUAGGUUUUAGGAAAGCAUUGUCUUGAUGGAAAUUG |
1 | PMID:20122185
"Prediction of novel miRNAs and associated target genes in Glycine max"; Joshi T, Yan Z, Libault M, Jeong DH, Park S, Green PJ, Sherrier DJ, Farmer A, May G, Meyers BC, Xu D, Stacey G; BMC Bioinformatics. 11 Suppl 1:S14(2010). |