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BaseInfo

ncRNA ID gma-miR4367
Species Glycine max
Class miRNA
Genome position chr1:2410094-2410318 [+]
Reference genome v1.0
Source miRBase
Length 22
Mature sequence(if miRNA) 149 - CUGAACCCUAGCGAAGUAAAUC - 170
Stem-loop(if miRNA)              A     A  CC                 A                       A             C              ------CU     CACU   GG
CAAUUUCCAUCAA ACAAU CU  CCUAAAACCUAGAACAA AUAUGAUAUAAUUGAUUUACUUC CUAGGGUUCAGGA AAUAUUCAAUCAUG        UGGCU    GCA  A
||||||||||||| ||||| ||  ||||||||||||||||| ||||||||||||||||||||||| ||||||||||||| ||||||||||||||        |||||    |||
GUUAAAGGUAGUU UGUUA GA  GGAUUUUGGAUCUUGUU UAUACUAUGUUAACUAAAUGAAG GAUCCCAAGUCCU UUAUAAGUUAGUAC        ACUGA    CGU  C
             C     C  AA                 C                       C             A              ACUCUCUU     ---U   AA
Stem-loop sequence CAAUUUCCAUCAAAACAAUACUCCCCUAAAACCUAGAACAAAAUAUGAUAUAAUUGAUUUACUUCACUAGGGUUCAGGACAAUAUUCAAUCAUGCUUGGCUCACUGCAGGACAAUGCUAGUCAUUCUCUCACAUGAUUGAAUAUUAUCCUGAACCCUAGCGAAGUAAAUCAAUUGUAUCAUAUCUUGUUCUAGGUUUUAGGAAAGCAUUGUCUUGAUGGAAAUUG

Reference

1 PMID:20122185
"Prediction of novel miRNAs and associated target genes in Glycine max";
Joshi T, Yan Z, Libault M, Jeong DH, Park S, Green PJ, Sherrier DJ, Farmer A, May G, Meyers BC, Xu D, Stacey G;
BMC Bioinformatics. 11 Suppl 1:S14(2010).