ncRNA ID | ath-miR8176 |
Species | Arabidopsis thaliana |
Class | miRNA |
Genome position | chr4:11795177-11795275 [+] |
Reference genome | TAIR10 |
Source | miRBase |
Length | 21 |
Mature sequence(if miRNA) | 23 - GGCCGGUGGUCGCGAGAGGGA - 43 |
Stem-loop(if miRNA) |
----U   UUGAA         -AUCU   C     -   --  A       U      AGA     UAAGAAGCU     GGC GGUGG UCG  CG GAGGGAU U      |||     |||||||||     ||| ||||| |||  || |||||||      UCU     AUUCUUUGA     UCG CUACU AGC  GC CUCUCUA A GUUUU   UUUAC         GCCAU   U     U   UG  -       G |
Stem-loop sequence | UAGAUUGAAUAAGAAGCUAUCUGGCCGGUGGUCGCGAGAGGGAUUUAGAUCUCUCCGGUCGAUUCAUCUGCUUACCGAGUUUCUUACAUUUUCUUUUUG |
1 | PMID:24119003
"Integrated RNA-seq and sRNA-seq analysis identifies novel nitrate-responsive genes in Arabidopsis thaliana roots"; Vidal EA, Moyano TC, Krouk G, Katari MS, Tanurdzic M, McCombie WR, Coruzzi GM, Gutierrez RA; BMC Genomics. 14:701(2013). |