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BaseInfo

ncRNA ID ath-miR8176
Species Arabidopsis thaliana
Class miRNA
Genome position chr4:11795177-11795275 [+]
Reference genome TAIR10
Source miRBase
Length 21
Mature sequence(if miRNA) 23 - GGCCGGUGGUCGCGAGAGGGA - 43
Stem-loop(if miRNA) ----U   UUGAA         -AUCU   C     -   --  A       U
     AGA     UAAGAAGCU     GGC GGUGG UCG  CG GAGGGAU U
     |||     |||||||||     ||| ||||| |||  || |||||||
     UCU     AUUCUUUGA     UCG CUACU AGC  GC CUCUCUA A
GUUUU   UUUAC         GCCAU   U     U   UG  -       G
Stem-loop sequence UAGAUUGAAUAAGAAGCUAUCUGGCCGGUGGUCGCGAGAGGGAUUUAGAUCUCUCCGGUCGAUUCAUCUGCUUACCGAGUUUCUUACAUUUUCUUUUUG

Reference

1 PMID:24119003
"Integrated RNA-seq and sRNA-seq analysis identifies novel nitrate-responsive genes in Arabidopsis thaliana roots";
Vidal EA, Moyano TC, Krouk G, Katari MS, Tanurdzic M, McCombie WR, Coruzzi GM, Gutierrez RA;
BMC Genomics. 14:701(2013).