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BaseInfo

ncRNA ID ath-miR867
Species Arabidopsis thaliana
Class miRNA
Genome position chr4:11375364-11375481 [+]
Reference genome TAIR10
Source miRBase
Length 21
Mature sequence(if miRNA) 24 - UUGAACAUGGUUUAUUAGGAA - 44
Stem-loop(if miRNA)    -C           A      C        G  U   U         -   ---   A
ACA  AUAAAACUAGU UAUUGC UUGAACAU GU UAU AGGAAAGAC AUG   AGA C
|||  ||||||||||| |||||| |||||||| || ||| ||||||||| |||   ||| A
UGU  UAUUUUGAUUA GUAAUG AACUUGUA CA AUA UCCUUUUUG UAC   UCU U
   UU           A      A        A  U   U         A   AAG   A
Stem-loop sequence ACACAUAAAACUAGUAUAUUGCCUUGAACAUGGUUUAUUAGGAAAGACAUGAGAACAUAUCUGAACAUAGUUUUUCCUUAUAUACAAUGUUCAAAGUAAUGAAUUAGUUUUAUUUUGU

Reference

1 PMID:17299599
"High-throughput sequencing of Arabidopsis microRNAs: evidence for frequent birth and death of MIRNA genes";
Fahlgren N, Howell MD, Kasschau KD, Chapman EJ, Sullivan CM, Cumbie JS, Givan SA, Law TF, Grant SR, Dangl JL, Carrington JC;
PLoS One. 2:e219(2007).