ncRNA ID | ath-miR1887 |
Species | Arabidopsis thaliana |
Class | miRNA |
Genome position | chr4:11370263-11370325 [+] |
Reference genome | TAIR10 |
Source | miRBase |
Length | 21 |
Mature sequence(if miRNA) | 39 - UACUAAGUAGAGUCUAAGAGA - 59 |
Stem-loop(if miRNA) |
U     A        G U           G  UGUUC CUUAGAUU U CUUAGUAUGAG U  ||||| |||||||| | ||||||||||| G  ACAAG GAAUCUGA A GAAUCAUGCUC U A     A        G U           U |
Stem-loop sequence | UUGUUCACUUAGAUUGUUCUUAGUAUGAGGUGUUCUCGUACUAAGUAGAGUCUAAGAGAACAA |
1 | PMID:18542052
"Global identification of microRNA-target RNA pairs by parallel analysis of RNA ends"; German MA, Pillay M, Jeong DH, Hetawal A, Luo S, Janardhanan P, Kannan V, Rymarquis LA, Nobuta K, German R, De Paoli E, Lu C, Schroth G, Meyers BC, Green PJ; Nat Biotechnol. 26:941-946(2008). |