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BaseInfo

ncRNA ID ath-miR1887
Species Arabidopsis thaliana
Class miRNA
Genome position chr4:11370263-11370325 [+]
Reference genome TAIR10
Source miRBase
Length 21
Mature sequence(if miRNA) 39 - UACUAAGUAGAGUCUAAGAGA - 59
Stem-loop(if miRNA) U     A        G U           G
 UGUUC CUUAGAUU U CUUAGUAUGAG U
 ||||| |||||||| | ||||||||||| G
 ACAAG GAAUCUGA A GAAUCAUGCUC U
A     A        G U           U
Stem-loop sequence UUGUUCACUUAGAUUGUUCUUAGUAUGAGGUGUUCUCGUACUAAGUAGAGUCUAAGAGAACAA

Reference

1 PMID:18542052
"Global identification of microRNA-target RNA pairs by parallel analysis of RNA ends";
German MA, Pillay M, Jeong DH, Hetawal A, Luo S, Janardhanan P, Kannan V, Rymarquis LA, Nobuta K, German R, De Paoli E, Lu C, Schroth G, Meyers BC, Green PJ;
Nat Biotechnol. 26:941-946(2008).