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BaseInfo

ncRNA ID novel_osa_miR3658
Species Oryza sativa
Class miRNA
Genome position Chr5:22538529-22538569 [-]
Reference genome IRGSP-1.0
Source SRR2040393
Length 19
Mature sequence(if miRNA) 1 - CUCAUCUCAAUUGGGCCUC - 19
Stem-loop(if miRNA) --              AU A
  GGCCCGAUUGAGAU  G A
  ||||||||||||||  | A
  CCGGGUUAACUCUA  C C
CU              CU C
Stem-loop sequence GGCCCGAUUGAGAUAUGAAACCCUCAUCUCAAUUGGGCCUC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
AK288346.1
ncRNA:19   CUCCGGGUUAACUCUACUC   1
  *||||||=|||||||||||
targets:555   UAGGCCCGAUUGAGAUGAG   573

2.5 Oryza sativa Japonica Group cDNA, clone: J090023M06, full insert sequence NA coding protein psRNATarget