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BaseInfo

ncRNA ID	novel_osa_miR3651
Species	Oryza sativa
Class	miRNA
Genome position	Chr2:2807235-2807342 [-]
Reference genome	IRGSP-1.0
Source	SRR2040393
Length	21
Mature sequence(if miRNA)	1 - UCUUCGUCAUCUCUCCUCUCC - 21
Stem-loop(if miRNA)	AGU  U    U   GA  -          G     AGUAG  GU   GGU   AU    GG GAGG GAG  GA GGAGAGGAGG CGAGU     GC  CUA   CCC  C    || |||| |||  || |||||||||| |||||     ||  |||   |||  U    CC CUCC CUC  CU CUUCUCCUCU GUUCG     UG  GAU   GGG  C ---  U    U   UA  G          -     GAUGA  AU   GAU   AU
Stem-loop sequence	AGUGGUGAGGUGAGGAGAGGAGAGGAGGGCGAGUAGUAGGCGUCUAGGUCCCAUCUCUAGGGUAGUAGUAGUAGUAGGCUUGUCUCCUCUUCGUCAUCUCUCCUCUCC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_015765447.1	ncRNA:21   CCUCUCCUCUCUACUGCUUCU   1   *|=|||||||||||=|||||| targets:654   AGGGAGGAGAGAUGGCGAAGA   674 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group synaptotagmin-5 (LOC4325968), mRNA	synaptotagmin-5(LOC4325968)	coding protein	psRNATarget
AK120447.1	ncRNA:21   CCUCUCCUCUCUACUGCUUCU   1   *|=|||||||||||=|||||| targets:43   AGGGAGGAGAGAUGGCGAAGA   63 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA clone:J013100G15, full insert sequence	NA	coding protein	psRNATarget
XM_015786671.1	ncRNA:21   CCUCUCCUCU-CUACUGCUUCU   1   *|||||||||-||||||||||| targets:2554   UGAGAGGAGAAGAUGACGAAGA   2575 Target Full Sequence	3.0	PREDICTED: Oryza sativa Japonica Group uncharacterized LOC107277464 (LOC107277464), mRNA	uncharacterized LOC107277464(LOC107277464)	coding protein	psRNATarget