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BaseInfo

ncRNA ID novel_osa_miR3634
Species Oryza sativa
Class miRNA
Genome position Chr1:30721638-30721687 [-]
Reference genome IRGSP-1.0
Source SRR2040393
Length 24
Mature sequence(if miRNA) 27 - GGUAGAUCUCGGCCAAGUUCGGGA - 50
Stem-loop(if miRNA) -   -       G   AA      G
 GGU AGAUCUC GCC  GUUCGG A
 ||| ||||||| |||  ||||||
 CCG UCUAGAG CGG  CAAGCC U
U   G       G   GG      A
Stem-loop sequence GGUAGAUCUCGGCCAAGUUCGGGAUACCGAACGGGGCGGAGAUCUGGCCU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_015774826.1
ncRNA:24   AGGGCUUGAACCGGCUCUAGAUGG   1
  ||||*||||*|||||||||||||=
targets:995   UCCCAAACUCGGCCGAGAUCUACU   1018

2.0 PREDICTED: Oryza sativa Japonica Group uncharacterized LOC4333256 (LOC4333256), mRNA uncharacterized LOC4333256(LOC4333256) coding protein psRNATarget
AK063408.1
ncRNA:24   AGGGCUUGAACCGGCUCUAGAUGG   1
  ||||*||||*|||||||||||||=
targets:1001   UCCCAAACUCGGCCGAGAUCUACU   1024

2.0 Oryza sativa Japonica Group cDNA clone:001-115-A11, full insert sequence NA coding protein psRNATarget