ncRNA ID | novel_osa_miR3632 |
Species | Oryza sativa |
Class | miRNA |
Genome position | Chr12:22562683-22562761 [-] |
Reference genome | IRGSP-1.0 |
Source | SRR1555747;SRR1555749;SRR1555751;SRR1556011;SRR1556016;SRR1556018;SRR1556020;SRR1654491 |
Length | 24 |
Mature sequence(if miRNA) | 1 - AAUUUUUAGUUGGUGUACAUGGUG - 24 |
Stem-loop(if miRNA) |
--  G     A     -       ----    UGUAU      U   CC AUGUA UGCUA UUGAAAG    CACA     GAAUUU U   || ||||| ||||| |||||||    ||||     ||||||   GG UACAU GUGGU GAUUUUU    GUGU     UUUAGA C GU  -     -     U       AAUA    --UUU      U |
Stem-loop sequence | CCGAUGUAAUGCUAUUGAAAGCACAUGUAUGAAUUUUUCUAGAUUUUUUUGUGAUAAUUUUUAGUUGGUGUACAUGGUG |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
AK288868.1 |
|
0.0 | Oryza sativa Japonica Group cDNA, clone: J090078E01, full insert sequence | NA | coding protein | psRNATarget | |||||||||
CT828650.1 |
|
0.0 | Oryza sativa (indica cultivar-group) cDNA clone:OSIGCPI006N06, full insert sequence | NA | coding protein | psRNATarget | |||||||||
AK070664.1 |
|
2.5 | Oryza sativa Japonica Group cDNA clone:J023056O15, full insert sequence | NA | coding protein | psRNATarget |