ncRNA ID | novel_osa_miR3629 |
Species | Oryza sativa |
Class | miRNA |
Genome position | Chr1:34403511-34403590 [+] |
Reference genome | IRGSP-1.0 |
Source | SRR2040393 |
Length | 23 |
Mature sequence(if miRNA) | 1 - AUAUAUCUUAUUACUAUGAAUCU - 23 |
Stem-loop(if miRNA) |
--A     CU  U  C             A      UAUU    UAUAU  UA UA UAUGAAUCUAGAC UAUGUA    U    |||||  || || ||||||||||||| ||||||    GUAUA  AU AU AUGCUUAGAUCUG AUGUAU    A UAG     AG  U  A             C      UUAG |
Stem-loop sequence | AUAUAUCUUAUUACUAUGAAUCUAGACAUAUGUAUAUUUAGAUUUAUGUACGUCUAGAUUCGUAAUAUUAGAAUAUGGAU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
AK063288.1 |
|
2.5 | Oryza sativa Japonica Group cDNA clone:001-113-D12, full insert sequence | NA | coding protein | psRNATarget |