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BaseInfo

ncRNA ID novel_osa_miR3629
Species Oryza sativa
Class miRNA
Genome position Chr1:34403511-34403590 [+]
Reference genome IRGSP-1.0
Source SRR2040393
Length 23
Mature sequence(if miRNA) 1 - AUAUAUCUUAUUACUAUGAAUCU - 23
Stem-loop(if miRNA) --A     CU  U  C             A      UAUU
   UAUAU  UA UA UAUGAAUCUAGAC UAUGUA    U
   |||||  || || ||||||||||||| ||||||
   GUAUA  AU AU AUGCUUAGAUCUG AUGUAU    A
UAG     AG  U  A             C      UUAG
Stem-loop sequence AUAUAUCUUAUUACUAUGAAUCUAGACAUAUGUAUAUUUAGAUUUAUGUACGUCUAGAUUCGUAAUAUUAGAAUAUGGAU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
AK063288.1
ncRNA:23   UCUAAGUAUCAUUAUUCUAUAUA   1
  ||||||=||||||||||||||*|
targets:1370   AGAUUCGUAGUAAUAAGAUAUUU   1392

2.5 Oryza sativa Japonica Group cDNA clone:001-113-D12, full insert sequence NA coding protein psRNATarget