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BaseInfo

ncRNA ID	novel_osa_miR3626
Species	Oryza sativa
Class	miRNA
Genome position	Chr1:25166251-25166303 [+]
Reference genome	IRGSP-1.0
Source	SRR2040393
Length	24
Mature sequence(if miRNA)	1 - AAUACGAACCGGGACUAAAGAUCU - 24
Stem-loop(if miRNA)	--     G        C        U   AAUAC AACCGGGA UAAAGAUC A   ||||| |||||||| |||||||| G   UUAUG UUGGCUCU AUUUCUAG A CA     G        A        C
Stem-loop sequence	AAUACGAACCGGGACUAAAGAUCUAGACGAUCUUUAAUCUCGGUUGGUAUUAC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
AK121178.1	ncRNA:24   UCUAGAAAUCAGGGCCAAGCAUAA   1   *|||||||||||||||||*||||| targets:1907   CGAUCUUUAGUCCCGGUUGGUAUU   1930 Target Full Sequence	1.5	Oryza sativa Japonica Group cDNA clone:J023083G22, full insert sequence	NA	coding protein	psRNATarget
AK066662.1	ncRNA:24   UCUAGAAAUCAGGGCCAAGCAUAA   1   =*|||||||||||||||||||||* targets:654   GUAUCUUUAGUCCCGGUUCGUAUC   677 Target Full Sequence	1.0	Oryza sativa Japonica Group cDNA clone:J013071A17, full insert sequence	NA	coding protein	psRNATarget
XM_015755884.1	ncRNA:24   UCUAGAAAUCAGGGCCAAGCAUAA   1   **||||||||||||||||*||||* targets:1373   UUAUCUUUAGUCCCGGUUGGUAUA   1396 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group S-norcoclaurine synthase 1 (LOC4346830), mRNA	S-norcoclaurine synthase 1(LOC4346830)	coding protein	psRNATarget
XM_015790121.1	ncRNA:24   UCUAGAAAUCAGGGCCAAGCAUAA   1   **||||||||||||||||*||||* targets:928   UAAUCUUUAGUCCCGGUUGGUAUG   951 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group putative disease resistance protein RGA4 (LOC107281518), transcript variant X2, mRNA	putative disease resistance protein RGA4(LOC107281518)	coding protein	psRNATarget
AK288470.1	ncRNA:24   UCUAGAAAUCAGGGCCAAGCAUAA   1   =***|||||||||||||||||*|| targets:28   GCCACUUUAGUCCCGGUUCGUUUU   51 Target Full Sequence	1.5	Oryza sativa Japonica Group cDNA, clone: J090037J05, full insert sequence	NA	coding protein	psRNATarget
XM_015782079.1	ncRNA:24   UCUAGAAAUCAGGGCCAAGCAUAA   1   =***|||||||||||||||||*|| targets:821   GCCACUUUAGUCCCGGUUCGUUUU   844 Target Full Sequence	1.5	PREDICTED: Oryza sativa Japonica Group E3 ubiquitin-protein ligase ZFP91-like (LOC107280837), mRNA	E3 ubiquitin-protein ligase ZFP91-like(LOC107280837)	coding protein	psRNATarget