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BaseInfo

ncRNA ID novel_osa_miR3624
Species Oryza sativa
Class miRNA
Genome position Chr12:3445312-3445429 [+]
Reference genome IRGSP-1.0
Source SRR1555747;SRR2099568;SRR1298766;SRR1556020;SRR1300837;SRR1298758
Length 24
Mature sequence(if miRNA) 95 - GACUUACACUGUGAAACGGAGGAA - 118
Stem-loop(if miRNA) --             A            -  C    UC  C          C     AU
  CCUCUGUUUCACA UGUAAGUCAUUU AG AUUU  CA AUUCAUAUAG UGUUA  G
  ||||||||||||| |||||||||||| || ||||  || |||||||||| |||||  A
  GGAGGCAAAGUGU ACAUUCAGUAAG UC UAAA  GU UAAGUAUAUC ACAAU  A
AA             C            A  A    GA  A          A     CU
Stem-loop sequence CCUCUGUUUCACAAUGUAAGUCAUUUAGCAUUUUCCACAUUCAUAUAGCUGUUAAUGAAUCUAACAACUAUAUGAAUAUGAGAAAUACUAGAAUGACUUACACUGUGAAACGGAGGAA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
AK288871.1
ncRNA:24   AAGGAGGCAAAGUGUCACAUUCAG   1
  |||||||||||||||*||||||||
targets:4263   UUCCUCCGUUUCACAAUGUAAGUC   4286

1.5 Oryza sativa Japonica Group cDNA, clone: J090078G09, full insert sequence NA coding protein psRNATarget
XM_015789040.1
ncRNA:24   AAGGAGGCAAAGUGUCACAUUCAG   1
  |||||||||||||||*||||||||
targets:4697   UUCCUCCGUUUCACAAUGUAAGUC   4720

1.5 PREDICTED: Oryza sativa Japonica Group uncharacterized LOC9266525 (LOC9266525), transcript variant X1, mRNA uncharacterized LOC9266525(LOC9266525) coding protein psRNATarget
AK121342.1
ncRNA:24   AAGGAGGCAAAGUGUCACAUUCAG   1
  |||||||||||||||*||||||||
targets:4531   UUCCUCCGUUUCACAAUGUAAGUC   4554

1.5 Oryza sativa Japonica Group cDNA clone:J023121A11, full insert sequence NA coding protein psRNATarget
AK288988.1
ncRNA:24   AAGGAGGCAAAGUGUCACAUUCAG   1
  |||||||||||||||*||||||||
targets:907   UUCCUCCGUUUCACAAUGUAAGUC   930

1.5 Oryza sativa Japonica Group cDNA, clone: J090086L17, full insert sequence NA coding protein psRNATarget
AK288568.1
ncRNA:24   AAGGAGGCAAAGUGUCACAUUCAG   1
  |||||||||||||||*||||||||
targets:2761   UUCCUCCGUUUCACAAUGUAAGUC   2784

1.5 Oryza sativa Japonica Group cDNA, clone: J090048B06, full insert sequence NA coding protein psRNATarget
XM_015764832.1
ncRNA:24   AAGGAGGCAAAGUGUCACAUUCAG   1
  |||||||||||||||*||||||||
targets:1167   UUCCUCCGUUUCACAAUGUAAGUC   1190

1.5 PREDICTED: Oryza sativa Japonica Group probable LRR receptor-like serine/threonine-protein kinase At3g47570 (LOC107276755), transcript variant X2, mRNA probable LRR receptor-like serine/threonine-protein kinase At3g47570(LOC107276755) coding protein psRNATarget
AK241705.1
ncRNA:24   AAGGAGGCAAAGUGUCACAUUCAG   1
  |||||||||||||||*||||||||
targets:3960   UUCCUCCGUUUCACAAUGUAAGUC   3983

1.5 Oryza sativa Japonica Group cDNA, clone: J065196L09, full insert sequence NA coding protein psRNATarget
XM_015759908.1
ncRNA:24   AAGGAGGCAAAGUGUCACAUUCAG   1
  |||||||||||||||*||||||||
targets:901   UUCCUCCGUUUCACAAUGUAAGUC   924

1.5 PREDICTED: Oryza sativa Japonica Group disease resistance protein RPM1 (LOC4350124), mRNA disease resistance protein RPM1(LOC4350124) coding protein psRNATarget
XM_015761417.1
ncRNA:24   AAGGAGGCAAAGUGUCACAUUCAG   1
  |||||||||||||||*||||||||
targets:309   UUCCUCCGUUUCACAAUGUAAGUC   332

1.5 PREDICTED: Oryza sativa Japonica Group uncharacterized LOC9270662 (LOC9270662), transcript variant X2, mRNA uncharacterized LOC9270662(LOC9270662) coding protein psRNATarget
AK242868.1
ncRNA:24   AAGGAGGCAAAGUGUCACAUUCAG   1
  |||||||||||||||*||||||||
targets:1697   UUCCUCCGUUUCACAAUGUAAGUC   1720

1.5 Oryza sativa Japonica Group cDNA, clone: J090076F12, full insert sequence NA coding protein psRNATarget
XM_015774902.1
ncRNA:24   AAGGAGGCAAAGUGUCACAUUCAG   1
  |||||||||||||||*||||||||
targets:1990   UUCCUCCGUUUCACAAUGUAAGUC   2013

1.5 PREDICTED: Oryza sativa Japonica Group beclin-1-like protein (LOC4333557), mRNA beclin-1-like protein(LOC4333557) coding protein psRNATarget
AK066359.1
ncRNA:24   AAGGAGGCAAAGUGUCACAUUCAG   1
  |||||||||||||||*||||||||
targets:1931   UUCCUCCGUUUCACAAUGUAAGUC   1954

1.5 Oryza sativa Japonica Group cDNA clone:J013066O06, full insert sequence NA coding protein psRNATarget
AK099664.1
ncRNA:24   AAGGAGGCAAAGUGUCACAUUCAG   1
  |||||||||||||||*||||||||
targets:1931   UUCCUCCGUUUCACAAUGUAAGUC   1954

1.5 Oryza sativa Japonica Group cDNA clone:J013066P07, full insert sequence NA coding protein psRNATarget
XM_015793141.1
ncRNA:24   AAGGAGGCAAAGUGUCACAUUCAG   1
  |||||||||||||||*||||||||
targets:1900   UUCCUCCGUUUCACAAUGUAAGUC   1923

1.5 PREDICTED: Oryza sativa Japonica Group uncharacterized LOC4344622 (LOC4344622), mRNA uncharacterized LOC4344622(LOC4344622) coding protein psRNATarget
XM_015763894.1
ncRNA:24   AAGGAGGCAAAGUGUCACAUUCAG   1
  |||||||||||||||*||||||||
targets:1884   UUCCUCCGUUUCACAAUGUAAGUC   1907

1.5 PREDICTED: Oryza sativa Japonica Group ureide permease 2 (LOC4352286), mRNA ureide permease 2(LOC4352286) coding protein psRNATarget
AK069916.1
ncRNA:24   AAGGAGGCAAAGUGUCACAUUCAG   1
  |||||||||||||||*||||||||
targets:1870   UUCCUCCGUUUCACAAUGUAAGUC   1893

1.5 Oryza sativa Japonica Group cDNA clone:J023038C16, full insert sequence NA coding protein psRNATarget
AK099655.1
ncRNA:24   AAGGAGGCAAAGUGUCACAUUCAG   1
  |||||||||||||||*||||||||
targets:675   UUCCUCCGUUUCACAAUGUAAGUC   698

1.5 Oryza sativa Japonica Group cDNA clone:J013066C07, full insert sequence NA coding protein psRNATarget
CT831392.1
ncRNA:24   AAGGAGGCAAAGUGUCACAUUCAG   1
  |||||||||||||||*||||||||
targets:392   UUCCUCCGUUUCACAAUGUAAGUC   415

1.5 Oryza sativa (indica cultivar-group) cDNA clone:OSIGCSN035F20, full insert sequence NA coding protein psRNATarget
BT131317.1
ncRNA:24   AAGGAGGCAAAGUGUCACAUUCAG   1
  |||||||||||||||*||||||||
targets:482   UUCCUCCGUUUCACAAUGUAAGUC   505

1.5 Oryza sativa clone RRlibB00677 mRNA sequence NA coding protein psRNATarget
XM_015764199.1
ncRNA:24   AAGGAGGCAAAGUGUCACAUUCAG   1
  ||=||||||||||||*||||||||
targets:3696   UUUCUCCGUUUCACAAUGUAAGUC   3719

1.5 PREDICTED: Oryza sativa Japonica Group uncharacterized LOC4351993 (LOC4351993), transcript variant X2, mRNA uncharacterized LOC4351993(LOC4351993) coding protein psRNATarget
XM_015764200.1
ncRNA:24   AAGGAGGCAAAGUGUCACAUUCAG   1
  ||=||||||||||||*||||||||
targets:3397   UUUCUCCGUUUCACAAUGUAAGUC   3420

1.5 PREDICTED: Oryza sativa Japonica Group uncharacterized LOC4351993 (LOC4351993), transcript variant X3, mRNA uncharacterized LOC4351993(LOC4351993) coding protein psRNATarget
XM_015764201.1
ncRNA:24   AAGGAGGCAAAGUGUCACAUUCAG   1
  ||=||||||||||||*||||||||
targets:3395   UUUCUCCGUUUCACAAUGUAAGUC   3418

1.5 PREDICTED: Oryza sativa Japonica Group uncharacterized LOC4351993 (LOC4351993), transcript variant X4, mRNA uncharacterized LOC4351993(LOC4351993) coding protein psRNATarget
AK103843.1
ncRNA:24   AAGGAGGCAAAGUGUCACAUUCAG   1
  ||=||||||||||||*||||||||
targets:3398   UUUCUCCGUUUCACAAUGUAAGUC   3421

1.5 Oryza sativa Japonica Group cDNA clone:J033148J12, full insert sequence NA coding protein psRNATarget
AK121318.1
ncRNA:24   AAGGAGGCAAAGUGUCACAUUCAG   1
  ||=||||||||||||*||||||||
targets:3289   UUUCUCCGUUUCACAAUGUAAGUC   3312

1.5 Oryza sativa Japonica Group cDNA clone:J023113P04, full insert sequence NA coding protein psRNATarget
XM_015764198.1
ncRNA:24   AAGGAGGCAAAGUGUCACAUUCAG   1
  ||=||||||||||||*||||||||
targets:3153   UUUCUCCGUUUCACAAUGUAAGUC   3176

1.5 PREDICTED: Oryza sativa Japonica Group uncharacterized LOC4351993 (LOC4351993), transcript variant X1, mRNA uncharacterized LOC4351993(LOC4351993) coding protein psRNATarget
XM_015788755.1
ncRNA:24   AAGGAGGCAAAGUGUCACAUUCAG   1
  |||||=|||||||||*||||||||
targets:2644   UUCCUUCGUUUCACAAUGUAAGUC   2667

2.5 PREDICTED: Oryza sativa Japonica Group soluble starch synthase 1, chloroplastic/amyloplastic (LOC9269493), mRNA soluble starch synthase 1, chloroplastic/amyloplastic(LOC9269493) coding protein psRNATarget
XM_015793036.1
ncRNA:24   AAGGAGGCAAAGUGUCACAUUCAG   1
  |||=|||||||||||*||||||||
targets:2368   UUCUUCCGUUUCACAAUGUAAGUC   2391

1.5 PREDICTED: Oryza sativa Japonica Group uncharacterized LOC4346282 (LOC4346282), transcript variant X5, mRNA uncharacterized LOC4346282(Os08g0555650) coding protein psRNATarget
XM_015793035.1
ncRNA:24   AAGGAGGCAAAGUGUCACAUUCAG   1
  |||=|||||||||||*||||||||
targets:2291   UUCUUCCGUUUCACAAUGUAAGUC   2314

1.5 PREDICTED: Oryza sativa Japonica Group uncharacterized LOC4346282 (LOC4346282), transcript variant X4, mRNA uncharacterized LOC4346282(Os08g0555650) coding protein psRNATarget
AK072022.1
ncRNA:24   AAGGAGGCAAAGUGUCACAUUCAG   1
  ||=||||||||||||*||||||||
targets:2157   UUUCUCCGUUUCACAAUGUAAGUC   2180

1.5 Oryza sativa Japonica Group cDNA clone:J013105F11, full insert sequence NA coding protein psRNATarget
XM_015757484.1
ncRNA:24   AAGGAGGCAAAGUGUCACAUUCAG   1
  ||=||||||||||||*||||||||
targets:1819   UUUCUCCGUUUCACAAUGUAAGUC   1842

1.5 PREDICTED: Oryza sativa Japonica Group uncharacterized GTP-binding protein At5g64813 (LOC4348056), transcript variant X2, mRNA uncharacterized GTP-binding protein At5g64813(LOC4348056) coding protein psRNATarget
AK064965.1
ncRNA:24   AAGGAGGCAAAGUGUCACAUUCAG   1
  ||||||=||||||||*||||||||
targets:1612   UUCCUCUGUUUCACAAUGUAAGUC   1635

2.5 Oryza sativa Japonica Group cDNA clone:J013001B01, full insert sequence NA coding protein psRNATarget
XM_015757483.1
ncRNA:24   AAGGAGGCAAAGUGUCACAUUCAG   1
  ||=||||||||||||*||||||||
targets:1731   UUUCUCCGUUUCACAAUGUAAGUC   1754

1.5 PREDICTED: Oryza sativa Japonica Group uncharacterized GTP-binding protein At5g64813 (LOC4348056), transcript variant X1, mRNA uncharacterized GTP-binding protein At5g64813(LOC4348056) coding protein psRNATarget
XM_015757485.1
ncRNA:24   AAGGAGGCAAAGUGUCACAUUCAG   1
  ||=||||||||||||*||||||||
targets:1702   UUUCUCCGUUUCACAAUGUAAGUC   1725

1.5 PREDICTED: Oryza sativa Japonica Group uncharacterized GTP-binding protein At5g64813 (LOC4348056), transcript variant X3, mRNA uncharacterized GTP-binding protein At5g64813(LOC4348056) coding protein psRNATarget
CT837594.1
ncRNA:24   AAGGAGGCAAAGUGUCACAUUCAG   1
  ||=||||||||||||*||||||||
targets:1266   UUUCUCCGUUUCACAAUGUAAGUC   1289

1.5 Oryza sativa (indica cultivar-group) cDNA clone:OSIGCSN021M15, full insert sequence NA coding protein psRNATarget
AK242637.1
ncRNA:24   AAGGAGGCAAAGUGUCACAUUCAG   1
  ||=||||||||||||*||||||||
targets:617   UUUCUCCGUUUCACAAUGUAAGUC   640

1.5 Oryza sativa Japonica Group cDNA, clone: J090023H18, full insert sequence NA coding protein psRNATarget
XM_015779859.1
ncRNA:24   AAGGAGGCAAAGUGUCACAUUCAG   1
  |||||=|||||||||*||||||||
targets:906   UUCCUUCGUUUCACAAUGUAAGUC   929

2.5 PREDICTED: Oryza sativa Japonica Group formin-like protein 3 (LOC4335722), mRNA formin-like protein 3(LOC4335722) coding protein psRNATarget
AK288390.1
ncRNA:24   AAGGAGGCAAAGUGUCACAUUCAG   1
  *||||||||||||||*||||||||
targets:659   AUCCUCCGUUUCACAAUGUAAGUC   682

1.5 Oryza sativa Japonica Group cDNA, clone: J090027G18, full insert sequence NA coding protein psRNATarget
AK288390.1
ncRNA:24   AAGGAGGCAAAGUGUCACAUUCAG   1
  *||||||*|||||||*||||||||
targets:620   AUCCUCCAUUUCACAAUGUAAGUC   643

2.5 Oryza sativa Japonica Group cDNA, clone: J090027G18, full insert sequence NA coding protein psRNATarget
XM_015759228.1
ncRNA:24   AAGGAGGCAAAGUGUCACAUUCAG   1
  |||||||||||||||*|||||||*
targets:2067   UUCCUCCGUUUCACAAUGUAAGUA   2090

2.5 PREDICTED: Oryza sativa Japonica Group MLO-like protein 9 (LOC4349258), mRNA MLO-like protein 9(LOC4349258) coding protein psRNATarget
XM_015777143.1
ncRNA:24   AAGGAGGCAAAGUGUCACAUUCAG   1
  *||||||||||||||*||||||||
targets:1885   CUCCUCCGUUUCACAAUGUAAGUC   1908

1.5 PREDICTED: Oryza sativa Japonica Group lecithin-cholesterol acyltransferase-like 1 (LOC4333995), mRNA lecithin-cholesterol acyltransferase-like 1(LOC4333995) coding protein psRNATarget
AK072272.1
ncRNA:24   AAGGAGGCAAAGUGUCACAUUCAG   1
  |||||||||||||||*|||||||*
targets:1807   UUCCUCCGUUUCACAAUGUAAGUA   1830

2.5 Oryza sativa Japonica Group cDNA clone:J023004C21, full insert sequence NA coding protein psRNATarget
AK071679.1
ncRNA:24   AAGGAGGCAAAGUGUCACAUUCAG   1
  *||||||||||||||*||||||||
targets:1769   CUCCUCCGUUUCACAAUGUAAGUC   1792

1.5 Oryza sativa Japonica Group cDNA clone:J023108I08, full insert sequence NA coding protein psRNATarget
AK240780.1
ncRNA:24   AAGGAGGCAAAGUGUCACAUUCAG   1
  ||=|||=||||||||*||||||||
targets:907   UUUCUCUGUUUCACAAUGUAAGUC   930

2.5 Oryza sativa Japonica Group cDNA, clone: J053075H13, full insert sequence NA coding protein psRNATarget
XM_015756141.1
ncRNA:24   AAGG-AGGCAAAGUGUCACAUUCAG   1
  ||||-|||||||||||*||||||||
targets:2408   UUCCCUCCGUUUCACAAUGUAAGUC   2432

1.5 PREDICTED: Oryza sativa Japonica Group dynamin-related protein 1E (LOC4347929), transcript variant X1, mRNA dynamin-related protein 1E(LOC4347929) coding protein psRNATarget
XM_015756142.1
ncRNA:24   AAGG-AGGCAAAGUGUCACAUUCAG   1
  ||||-|||||||||||*||||||||
targets:2311   UUCCCUCCGUUUCACAAUGUAAGUC   2335

1.5 PREDICTED: Oryza sativa Japonica Group dynamin-related protein 1E (LOC4347929), transcript variant X2, mRNA dynamin-related protein 1E(LOC4347929) coding protein psRNATarget
XM_015764779.1
ncRNA:24   AAGGAGGCAAAGUGUCACAUUCAG   1
  |||||*|||||||||*||||||||
targets:4377   UUCCUACGUUUCACAAUGUAAGUC   4400

2.5 PREDICTED: Oryza sativa Japonica Group putative disease resistance RPP13-like protein 3 (LOC4352543), transcript variant X4, mRNA putative disease resistance RPP13-like protein 3(LOC4352543) coding protein psRNATarget
XM_015768952.1
ncRNA:24   AAGGAGGCAAAGUGUCACAUUCAG   1
  |*|||||||||||||*||||||||
targets:4532   UCCCUCCGUUUCACAAUGUAAGUC   4555

1.5 PREDICTED: Oryza sativa Japonica Group uncharacterized LOC9269313 (LOC9269313), mRNA uncharacterized LOC9269313(LOC9269313) coding protein psRNATarget
AK289050.1
ncRNA:24   AAGGAGGCAAAGUGUCACAUUCAG   1
  |*|||||||||||||*||||||||
targets:2832   UCCCUCCGUUUCACAAUGUAAGUC   2855

1.5 Oryza sativa Japonica Group cDNA, clone: J090092O13, full insert sequence NA coding protein psRNATarget
AK289050.1
ncRNA:24   AAGGAGGCAAAGUGUCACAUUCAG   1
  |||*|||||||||||*|||||||=
targets:4350   UUCAUCCGUUUCACAAUGUAAGUU   4373

2.5 Oryza sativa Japonica Group cDNA, clone: J090092O13, full insert sequence NA coding protein psRNATarget
XM_015764777.1
ncRNA:24   AAGGAGGCAAAGUGUCACAUUCAG   1
  |||||*|||||||||*||||||||
targets:3543   UUCCUACGUUUCACAAUGUAAGUC   3566

2.5 PREDICTED: Oryza sativa Japonica Group putative disease resistance RPP13-like protein 3 (LOC4352543), transcript variant X2, mRNA putative disease resistance RPP13-like protein 3(LOC4352543) coding protein psRNATarget
XM_015764776.1
ncRNA:24   AAGGAGGCAAAGUGUCACAUUCAG   1
  |||||*|||||||||*||||||||
targets:3307   UUCCUACGUUUCACAAUGUAAGUC   3330

2.5 PREDICTED: Oryza sativa Japonica Group putative disease resistance RPP13-like protein 3 (LOC4352543), transcript variant X1, mRNA putative disease resistance RPP13-like protein 3(LOC4352543) coding protein psRNATarget
XM_015764778.1
ncRNA:24   AAGGAGGCAAAGUGUCACAUUCAG   1
  |||||*|||||||||*||||||||
targets:3302   UUCCUACGUUUCACAAUGUAAGUC   3325

2.5 PREDICTED: Oryza sativa Japonica Group putative disease resistance RPP13-like protein 3 (LOC4352543), transcript variant X3, mRNA putative disease resistance RPP13-like protein 3(LOC4352543) coding protein psRNATarget
XM_015781780.1
ncRNA:24   AAGGAGGCAAAGUGUCACAUUCAG   1
  |*|||||||||||||*||||||||
targets:3125   UCCCUCCGUUUCACAAUGUAAGUC   3148

1.5 PREDICTED: Oryza sativa Japonica Group protein ASPARTIC PROTEASE IN GUARD CELL 2 (LOC4337402), mRNA protein ASPARTIC PROTEASE IN GUARD CELL 2(LOC4337402) coding protein psRNATarget
AK102955.1
ncRNA:24   AAGGAGGCAAAGUGUCACAUUCAG   1
  |*|||||||||||||*||||||||
targets:749   UCCCUCCGUUUCACAAUGUAAGUC   772

1.5 Oryza sativa Japonica Group cDNA clone:J033115G04, full insert sequence NA coding protein psRNATarget
AK119344.1
ncRNA:24   AAGGAGGCAAAGUGUCACAUUCAG   1
  |||||||*||||||||||||||*|
targets:1144   UUCCUCCAUUUCACAGUGUAAGAC   1167

2.5 Oryza sativa Japonica Group cDNA clone:001-131-E01, full insert sequence NA coding protein psRNATarget
XM_015779937.1
ncRNA:24   AAGGAGGCAAAGUGUCACAUUCAG   1
  |*|||||||||||||*||||||||
targets:960   UCCCUCCGUUUCACAAUGUAAGUC   983

1.5 PREDICTED: Oryza sativa Japonica Group small nuclear ribonucleoprotein Sm D1 (LOC4336118), transcript variant X1, mRNA small nuclear ribonucleoprotein Sm D1(LOC4336118) coding protein psRNATarget
AK288811.1
ncRNA:24   AAGGAGGCAAAGUGUCACAUUCAG   1
  |||||||*|||||||*||||||||
targets:1334   UUCCUCCAUUUCACAAUGUAAGUC   1357

2.5 Oryza sativa Japonica Group cDNA, clone: J090072B06, full insert sequence NA coding protein psRNATarget
XM_015779938.1
ncRNA:24   AAGGAGGCAAAGUGUCACAUUCAG   1
  |*|||||||||||||*||||||||
targets:868   UCCCUCCGUUUCACAAUGUAAGUC   891

1.5 PREDICTED: Oryza sativa Japonica Group small nuclear ribonucleoprotein Sm D1 (LOC4336118), transcript variant X2, mRNA small nuclear ribonucleoprotein Sm D1(LOC4336118) coding protein psRNATarget
XM_015778179.1
ncRNA:24   AAGGAGGCAAAGUGUCACAUUCAG   1
  |*|||||||||||||*||||||||
targets:1608   UCCCUCCGUUUCACAAUGUAAGUC   1631

1.5 PREDICTED: Oryza sativa Japonica Group methylthioribose kinase 2 (LOC107276080), mRNA methylthioribose kinase 2(LOC107276080) coding protein psRNATarget
AK120148.1
ncRNA:24   AAGGAGGCAAAGUGUCACAUUCAG   1
  |*|||||||||||||*||||||||
targets:443   UCCCUCCGUUUCACAAUGUAAGUC   466

1.5 Oryza sativa Japonica Group cDNA clone:J013029J05, full insert sequence NA coding protein psRNATarget
XM_015769984.1
ncRNA:24   AAGGAGGCAAAGUGUCACAUUCAG   1
  |*|||||||||||||*||||||||
targets:1516   UCCCUCCGUUUCACAAUGUAAGUC   1539

1.5 PREDICTED: Oryza sativa Japonica Group glutathionyl-hydroquinone reductase YqjG (LOC4329160), transcript variant X2, mRNA glutathionyl-hydroquinone reductase YqjG(LOC4329160) coding protein psRNATarget
AK106586.1
ncRNA:24   AAGGAGGCAAAGUGUCACAUUCAG   1
  |*|||||||||||||*||||||||
targets:594   UCCCUCCGUUUCACAAUGUAAGUC   617

1.5 Oryza sativa Japonica Group cDNA clone:002-111-E12, full insert sequence NA coding protein psRNATarget
XM_015769983.1
ncRNA:24   AAGGAGGCAAAGUGUCACAUUCAG   1
  |*|||||||||||||*||||||||
targets:1357   UCCCUCCGUUUCACAAUGUAAGUC   1380

1.5 PREDICTED: Oryza sativa Japonica Group glutathionyl-hydroquinone reductase YqjG (LOC4329160), transcript variant X1, mRNA glutathionyl-hydroquinone reductase YqjG(LOC4329160) coding protein psRNATarget
XM_015769985.1
ncRNA:24   AAGGAGGCAAAGUGUCACAUUCAG   1
  |*|||||||||||||*||||||||
targets:1255   UCCCUCCGUUUCACAAUGUAAGUC   1278

1.5 PREDICTED: Oryza sativa Japonica Group glutathionyl-hydroquinone reductase YqjG (LOC4329160), transcript variant X3, mRNA glutathionyl-hydroquinone reductase YqjG(LOC4329160) coding protein psRNATarget
XM_015764394.1
ncRNA:24   AAGGAGGCAAAGUGUCACAUUCAG   1
  |*|||||||||||||*||||||||
targets:1280   UCCCUCCGUUUCACAAUGUAAGUC   1303

1.5 PREDICTED: Oryza sativa Japonica Group vesicle-associated membrane protein 721 (LOC4352920), mRNA vesicle-associated membrane protein 721(LOC4352920) coding protein psRNATarget
AK110888.1
ncRNA:24   AAGGAGGCAAAGUGUCACAUUCAG   1
  |||*|||||||||||*||||||||
targets:1181   UUCAUCCGUUUCACAAUGUAAGUC   1204

1.5 Oryza sativa Japonica Group cDNA clone:002-172-H04, full insert sequence NA coding protein psRNATarget
CT831709.1
ncRNA:24   AAGGAGGCAAAGUGUCACAUUCAG   1
  |*|||||||||||||*||||||||
targets:1122   UCCCUCCGUUUCACAAUGUAAGUC   1145

1.5 Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRA128P05, full insert sequence NA coding protein psRNATarget
XM_015763560.1
ncRNA:24   AAGGAGGCAAAGUGUCACAUUCAG   1
  |||||||*|||||||*||||||||
targets:964   UUCCUCCAUUUCACAAUGUAAGUC   987

2.5 PREDICTED: Oryza sativa Japonica Group uncharacterized LOC107278415 (LOC107278415), mRNA uncharacterized LOC107278415(LOC107278415) coding protein psRNATarget
AK069409.1
ncRNA:24   AAGGAGGCAAAGUGUCACAUUCAG   1
  |*|||||||||||||*||||||||
targets:1142   UCCCUCCGUUUCACAAUGUAAGUC   1165

1.5 Oryza sativa Japonica Group cDNA clone:J023018M02, full insert sequence NA coding protein psRNATarget
AK105036.1
ncRNA:24   AAGGAGGCAAAGUGUCACAUUCAG   1
  |*|||||||||||||*||||||||
targets:259   UCCCUCCGUUUCACAAUGUAAGUC   282

1.5 Oryza sativa Japonica Group cDNA clone:001-032-B07, full insert sequence NA coding protein psRNATarget
XM_015788194.1
ncRNA:24   AAGG-AGGCAAAGUGUCACAUUCAG   1
  ||||-|=|||||||||*||||||||
targets:1737   UUCCCUUCGUUUCACAAUGUAAGUC   1761

2.5 PREDICTED: Oryza sativa Japonica Group embryonic stem cell-specific 5-hydroxymethylcytosine-binding protein (LOC4341015), transcript variant X1, mRNA embryonic stem cell-specific 5-hydroxymethylcytosine-binding protein(LOC4341015) coding protein psRNATarget
XM_015788196.1
ncRNA:24   AAGG-AGGCAAAGUGUCACAUUCAG   1
  ||||-|=|||||||||*||||||||
targets:1718   UUCCCUUCGUUUCACAAUGUAAGUC   1742

2.5 PREDICTED: Oryza sativa Japonica Group embryonic stem cell-specific 5-hydroxymethylcytosine-binding protein (LOC4341015), transcript variant X3, mRNA embryonic stem cell-specific 5-hydroxymethylcytosine-binding protein(LOC4341015) coding protein psRNATarget
XM_015788195.1
ncRNA:24   AAGG-AGGCAAAGUGUCACAUUCAG   1
  ||||-|=|||||||||*||||||||
targets:1707   UUCCCUUCGUUUCACAAUGUAAGUC   1731

2.5 PREDICTED: Oryza sativa Japonica Group embryonic stem cell-specific 5-hydroxymethylcytosine-binding protein (LOC4341015), transcript variant X2, mRNA embryonic stem cell-specific 5-hydroxymethylcytosine-binding protein(LOC4341015) coding protein psRNATarget
AK120281.1
ncRNA:24   AAGGAGGCAAAGUGUCACAUUCAG   1
  |*||||=||||||||*||||||||
targets:1029   UCCCUCUGUUUCACAAUGUAAGUC   1052

2.5 Oryza sativa Japonica Group cDNA clone:J013049I08, full insert sequence NA coding protein psRNATarget
XM_015767758.1
ncRNA:24   AAG-GAGGCAAAGUGUCACAUUCAG   1
  *||-||||||||||||*||||||||
targets:3728   CUCUCUCCGUUUCACAAUGUAAGUC   3752

1.5 PREDICTED: Oryza sativa Japonica Group transcription factor bHLH68 (LOC4325885), transcript variant X3, mRNA transcription factor bHLH68(LOC4325885) coding protein psRNATarget
XM_015788932.1
ncRNA:24   AAGGAGGCAAAGUGUCACAUUCAG   1
  |*|||||||||||||*|||||||=
targets:2879   UCCCUCCGUUUCACAAUGUAAGUU   2902

2.5 PREDICTED: Oryza sativa Japonica Group kanadaptin (LOC4340752), mRNA kanadaptin(LOC4340752) coding protein psRNATarget
XM_015795349.1
ncRNA:24   AAGGAGGCAAAGUGUCACAUUCAG   1
  |*||||=||||||||*||||||||
targets:2468   UACCUCUGUUUCACAAUGUAAGUC   2491

2.5 PREDICTED: Oryza sativa Japonica Group protein HOTHEAD (LOC4345513), mRNA protein HOTHEAD(LOC4345513) coding protein psRNATarget
AK105572.1
ncRNA:24   AAGGAGGCAAAGUGUCACAUUCAG   1
  |*=|||||||||||||||||||*|
targets:554   UAUCUCCGUUUCACAGUGUAAGCC   577

1.5 Oryza sativa Japonica Group cDNA clone:001-128-D03, full insert sequence NA coding protein psRNATarget
XM_015788299.1
ncRNA:24   AAG-GAGGCAAAGUGUCACAUUCAG   1
  *||-||||||||||||*||||||||
targets:608   CUCUCUCCGUUUCACAAUGUAAGUC   632

1.5 PREDICTED: Oryza sativa Japonica Group GPI-anchored protein LORELEI (LOC4340837), transcript variant X1, mRNA GPI-anchored protein LORELEI(LOC4340837) coding protein psRNATarget
XM_015788302.1
ncRNA:24   AAG-GAGGCAAAGUGUCACAUUCAG   1
  *||-||||||||||||*||||||||
targets:586   CUCUCUCCGUUUCACAAUGUAAGUC   610

1.5 PREDICTED: Oryza sativa Japonica Group GPI-anchored protein LORELEI (LOC4340837), transcript variant X3, mRNA GPI-anchored protein LORELEI(LOC4340837) coding protein psRNATarget
XM_015788300.1
ncRNA:24   AAG-GAGGCAAAGUGUCACAUUCAG   1
  *||-||||||||||||*||||||||
targets:577   CUCUCUCCGUUUCACAAUGUAAGUC   601

1.5 PREDICTED: Oryza sativa Japonica Group GPI-anchored protein LORELEI (LOC4340837), transcript variant X2, mRNA GPI-anchored protein LORELEI(LOC4340837) coding protein psRNATarget
AK100772.1
ncRNA:24   AAG-GAGGCAAAGUGUCACAUUCAG   1
  *||-||||||||||||*||||||||
targets:579   CUCUCUCCGUUUCACAAUGUAAGUC   603

1.5 Oryza sativa Japonica Group cDNA clone:J023120A05, full insert sequence NA coding protein psRNATarget
XM_015758813.1
ncRNA:24   AAGG-AGGCAAAGUGUCACAUUCAG   1
  *|||-|=|||||||||*||||||||
targets:1531   CUCCAUUCGUUUCACAAUGUAAGUC   1555

2.5 PREDICTED: Oryza sativa Japonica Group protein NEN1 (LOC9268899), transcript variant X2, mRNA protein NEN1(LOC9268899) coding protein psRNATarget
XM_015758812.1
ncRNA:24   AAGG-AGGCAAAGUGUCACAUUCAG   1
  *|||-|=|||||||||*||||||||
targets:1358   CUCCAUUCGUUUCACAAUGUAAGUC   1382

2.5 PREDICTED: Oryza sativa Japonica Group protein NEN1 (LOC9268899), transcript variant X1, mRNA protein NEN1(LOC9268899) coding protein psRNATarget
AK243498.1
ncRNA:24   AAGG-AGGCAAAGUGUCACAUUCAG   1
  *|||-|=|||||||||*||||||||
targets:1365   CUCCAUUCGUUUCACAAUGUAAGUC   1389

2.5 Oryza sativa Japonica Group cDNA, clone: J100074F07, full insert sequence NA coding protein psRNATarget
XM_015766661.1
ncRNA:24   AAGGAGGCAAAGUGUCACAUUCAG   1
  |*|||||*|||||||*||||||||
targets:5099   UCCCUCCAUUUCACAAUGUAAGUC   5122

2.5 PREDICTED: Oryza sativa Japonica Group glycerol-3-phosphate 2-O-acyltransferase 6 (LOC4324826), transcript variant X3, mRNA glycerol-3-phosphate 2-O-acyltransferase 6(LOC4324826) coding protein psRNATarget
XM_015766659.1
ncRNA:24   AAGGAGGCAAAGUGUCACAUUCAG   1
  |*|||||*|||||||*||||||||
targets:5066   UCCCUCCAUUUCACAAUGUAAGUC   5089

2.5 PREDICTED: Oryza sativa Japonica Group glycerol-3-phosphate 2-O-acyltransferase 6 (LOC4324826), transcript variant X1, mRNA glycerol-3-phosphate 2-O-acyltransferase 6(LOC4324826) coding protein psRNATarget
XM_015766663.1
ncRNA:24   AAGGAGGCAAAGUGUCACAUUCAG   1
  |*|||||*|||||||*||||||||
targets:4978   UCCCUCCAUUUCACAAUGUAAGUC   5001

2.5 PREDICTED: Oryza sativa Japonica Group glycerol-3-phosphate 2-O-acyltransferase 6 (LOC4324826), transcript variant X5, mRNA glycerol-3-phosphate 2-O-acyltransferase 6(LOC4324826) coding protein psRNATarget
XM_015766660.1
ncRNA:24   AAGGAGGCAAAGUGUCACAUUCAG   1
  |*|||||*|||||||*||||||||
targets:4438   UCCCUCCAUUUCACAAUGUAAGUC   4461

2.5 PREDICTED: Oryza sativa Japonica Group glycerol-3-phosphate 2-O-acyltransferase 6 (LOC4324826), transcript variant X2, mRNA glycerol-3-phosphate 2-O-acyltransferase 6(LOC4324826) coding protein psRNATarget
XM_015766662.1
ncRNA:24   AAGGAGGCAAAGUGUCACAUUCAG   1
  |*|||||*|||||||*||||||||
targets:4406   UCCCUCCAUUUCACAAUGUAAGUC   4429

2.5 PREDICTED: Oryza sativa Japonica Group glycerol-3-phosphate 2-O-acyltransferase 6 (LOC4324826), transcript variant X4, mRNA glycerol-3-phosphate 2-O-acyltransferase 6(LOC4324826) coding protein psRNATarget
XM_015766665.1
ncRNA:24   AAGGAGGCAAAGUGUCACAUUCAG   1
  |*|||||*|||||||*||||||||
targets:4149   UCCCUCCAUUUCACAAUGUAAGUC   4172

2.5 PREDICTED: Oryza sativa Japonica Group glycerol-3-phosphate 2-O-acyltransferase 6 (LOC4324826), transcript variant X7, mRNA glycerol-3-phosphate 2-O-acyltransferase 6(LOC4324826) coding protein psRNATarget
XM_015766664.1
ncRNA:24   AAGGAGGCAAAGUGUCACAUUCAG   1
  |*|||||*|||||||*||||||||
targets:3729   UCCCUCCAUUUCACAAUGUAAGUC   3752

2.5 PREDICTED: Oryza sativa Japonica Group glycerol-3-phosphate 2-O-acyltransferase 6 (LOC4324826), transcript variant X6, mRNA glycerol-3-phosphate 2-O-acyltransferase 6(LOC4324826) coding protein psRNATarget
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