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BaseInfo

ncRNA ID novel_osa_miR3619
Species Oryza sativa
Class miRNA
Genome position Chr12:24713021-24713144 [-]
Reference genome IRGSP-1.0
Source SRR1555747;SRR4407777;SRR4407960;SRR1556020
Length 24
Mature sequence(if miRNA) 1 - AUAUGAAUGUGGGCAAUGUUAGAA - 24
Stem-loop(if miRNA) ---C                     G                   ---C          CU GA
    AGCAUUGCCUACAUUCAUAUA AUGUUAAUGAAUCUAGGCA    AUAUAUAUGU  A  U
    ||||||||||||||||||||| |||||||||||||||||||    ||||||||||  |
    UUGUAACGGGUGUAAGUAUAU UACAAUUACUUAGAUCUGU    UAUAUAUACA  U  U
AAGA                     A                   AUAU          AU AC
Stem-loop sequence CAGCAUUGCCUACAUUCAUAUAGAUGUUAAUGAAUCUAGGCACAUAUAUAUGUCUAGAUUCAUUAACAUAUAUAUUAUAUGUCUAGAUUCAUUAACAUAUAUAUGAAUGUGGGCAAUGUUAGAA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_015765335.1
ncRNA:24   AAGAUUGUAACGGGUGUAAGUAUA   1
  |||||=||||||||||||||||||
targets:1201   UUCUAGCAUUGCCCACAUUCAUAU   1224

1.0 PREDICTED: Oryza sativa Japonica Group light-inducible protein CPRF2-like (LOC107276775), transcript variant X2, mRNA light-inducible protein CPRF2-like(LOC107276775) coding protein psRNATarget
CT837661.1
ncRNA:24   AAGAUUGUAACGGGUGUAAGUAUA   1
  |||||=||||||||||||||||||
targets:1201   UUCUAGCAUUGCCCACAUUCAUAU   1224

1.0 Oryza sativa (indica cultivar-group) cDNA clone:OSIGCSN063K17, full insert sequence NA coding protein psRNATarget
XM_015765333.1
ncRNA:24   AAGAUUGUAACGGGUGUAAGUAUA   1
  |||||=||||||||||||||||||
targets:2100   UUCUAGCAUUGCCCACAUUCAUAU   2123

1.0 PREDICTED: Oryza sativa Japonica Group light-inducible protein CPRF2-like (LOC107276775), transcript variant X1, mRNA light-inducible protein CPRF2-like(LOC107276775) coding protein psRNATarget
XM_015757225.1
ncRNA:24   AAGAUUGUAACGGGUGUAAGUAUA   1
  |||||=||||||||||||||||||
targets:2292   UUCUAGCAUUGCCCACAUUCAUAU   2315

1.0 PREDICTED: Oryza sativa Japonica Group pentatricopeptide repeat-containing protein At1g08610 (LOC4348896), mRNA pentatricopeptide repeat-containing protein At1g08610(LOC4348896) coding protein psRNATarget
AK103437.1
ncRNA:24   AAGAUUGUAACGGGUGUAAGUAUA   1
  |||||=||||||||||||||||||
targets:2364   UUCUAGCAUUGCCCACAUUCAUAU   2387

1.0 Oryza sativa Japonica Group cDNA clone:J033129C05, full insert sequence NA coding protein psRNATarget
AK288932.1
ncRNA:24   AAGAUUGUAACGGGUGUAAGUAUA   1
  |||||||||||||=||||||||||
targets:2977   UUCUAACAUUGCCUACAUUCAUAU   3000

1.5 Oryza sativa Japonica Group cDNA, clone: J090082H22, full insert sequence NA coding protein psRNATarget
XM_015769168.1
ncRNA:24   AAGAUUGUAACGGGUGUAAGUAUA   1
  |||||=||||||||||||||||||
targets:2678   UUCUAGCAUUGCCCACAUUCAUAU   2701

1.0 PREDICTED: Oryza sativa Japonica Group probable splicing factor 3A subunit 1 (LOC4328860), transcript variant X3, mRNA probable splicing factor 3A subunit 1(LOC4328860) coding protein psRNATarget
XM_015763234.1
ncRNA:24   AAGAUUGUAACGGGUGUAAGUAUA   1
  |||||=||||||||||||||||||
targets:6288   UUCUAGCAUUGCCCACAUUCAUAU   6311

1.0 PREDICTED: Oryza sativa Japonica Group F-box protein At5g25290 (LOC4326973), transcript variant X1, mRNA F-box protein At5g25290(LOC4326973) coding protein psRNATarget
XM_015790894.1
ncRNA:24   AAGAUUGUAACGGGUGUAAGUAUA   1
  |||||=|||||=||||||||||||
targets:558   UUCUAGCAUUGUCCACAUUCAUAU   581

2.5 PREDICTED: Oryza sativa Japonica Group uncharacterized LOC107276821 (LOC107276821), mRNA uncharacterized LOC107276821(LOC107276821) coding protein psRNATarget
CT836499.1
ncRNA:24   AAGAUUGUAACGGGUGUAAGUAUA   1
  |||||=||||||=|||||||||||
targets:479   UUCUAGCAUUGCUCACAUUCAUAU   502

2.5 Oryza sativa (indica cultivar-group) cDNA clone:OSIGCFA014C07, full insert sequence NA coding protein psRNATarget
XM_015769449.1
ncRNA:24   AAGAUUGUAACGGGUGUAAGUAUA   1
  ||=|||||||||=|||||||||||
targets:88   UUUUAACAUUGCUCACAUUCAUAU   111

1.5 PREDICTED: Oryza sativa Japonica Group ethylene-responsive transcription factor ERF018-like (LOC107278604), mRNA ethylene-responsive transcription factor ERF018-like(LOC107278604) coding protein psRNATarget
XM_015764678.1
ncRNA:24   AAGAUUGUAACGGGUGUAAGUAUA   1
  |||||=|||||=||||||||||||
targets:1608   UUCUAGCAUUGUCCACAUUCAUAU   1631

2.5 PREDICTED: Oryza sativa Japonica Group mannan endo-1,4-beta-mannosidase 8 (LOC9271116), mRNA mannan endo-1,4-beta-mannosidase 8(LOC9271116) coding protein psRNATarget
AK073522.1
ncRNA:24   AAGAUUGUAACGGGUGUAAGUAUA   1
  |||||=|||||=||||||||||||
targets:2492   UUCUAGCAUUGUCCACAUUCAUAU   2515

2.5 Oryza sativa Japonica Group cDNA clone:J033046G09, full insert sequence NA coding protein psRNATarget
XM_015766247.1
ncRNA:24   AAGAUUGUAACGGGUGUAAGUAUA   1
  ||=||=||||||||||||||||||
targets:2500   UUUUAGCAUUGCCCACAUUCAUAU   2523

1.0 PREDICTED: Oryza sativa Japonica Group putative receptor protein kinase ZmPK1 (LOC107277300), mRNA putative receptor protein kinase ZmPK1(LOC107277300) coding protein psRNATarget
AK288796.1
ncRNA:24   AAGAUUGUAACGGGUGUAAGUAUA   1
  |||||=||||||||=|||||||||
targets:768   UUCUAGCAUUGCCCGCAUUCAUAU   791

2.5 Oryza sativa Japonica Group cDNA, clone: J090070F05, full insert sequence NA coding protein psRNATarget
AK101666.1
ncRNA:24   AAGAUUGUAACGGGUGUAAGUAUA   1
  |||||==|||||||||||||||||
targets:1596   UUCUAGUAUUGCCCACAUUCAUAU   1619

2.0 Oryza sativa Japonica Group cDNA clone:J033057N11, full insert sequence NA coding protein psRNATarget
XM_015767218.1
ncRNA:24   AAGAUUGUAACGGGUGUAAGUAUA   1
  |||||=|||||=||||||||||||
targets:3703   UUCUAGCAUUGUCCACAUUCAUAU   3726

2.5 PREDICTED: Oryza sativa Japonica Group putative pentatricopeptide repeat-containing protein At5g43820 (LOC4329106), transcript variant X7, mRNA putative pentatricopeptide repeat-containing protein At5g43820(LOC4329106) coding protein psRNATarget
XM_015767215.1
ncRNA:24   AAGAUUGUAACGGGUGUAAGUAUA   1
  |||||=|||||=||||||||||||
targets:3799   UUCUAGCAUUGUCCACAUUCAUAU   3822

2.5 PREDICTED: Oryza sativa Japonica Group putative pentatricopeptide repeat-containing protein At5g43820 (LOC4329106), transcript variant X4, mRNA putative pentatricopeptide repeat-containing protein At5g43820(LOC4329106) coding protein psRNATarget
XM_015767217.1
ncRNA:24   AAGAUUGUAACGGGUGUAAGUAUA   1
  |||||=|||||=||||||||||||
targets:3858   UUCUAGCAUUGUCCACAUUCAUAU   3881

2.5 PREDICTED: Oryza sativa Japonica Group putative pentatricopeptide repeat-containing protein At5g43820 (LOC4329106), transcript variant X6, mRNA putative pentatricopeptide repeat-containing protein At5g43820(LOC4329106) coding protein psRNATarget
XM_015767212.1
ncRNA:24   AAGAUUGUAACGGGUGUAAGUAUA   1
  |||||=|||||=||||||||||||
targets:3925   UUCUAGCAUUGUCCACAUUCAUAU   3948

2.5 PREDICTED: Oryza sativa Japonica Group putative pentatricopeptide repeat-containing protein At5g43820 (LOC4329106), transcript variant X2, mRNA putative pentatricopeptide repeat-containing protein At5g43820(LOC4329106) coding protein psRNATarget
XM_015767214.1
ncRNA:24   AAGAUUGUAACGGGUGUAAGUAUA   1
  |||||=|||||=||||||||||||
targets:3954   UUCUAGCAUUGUCCACAUUCAUAU   3977

2.5 PREDICTED: Oryza sativa Japonica Group putative pentatricopeptide repeat-containing protein At5g43820 (LOC4329106), transcript variant X3, mRNA putative pentatricopeptide repeat-containing protein At5g43820(LOC4329106) coding protein psRNATarget
XM_015767211.1
ncRNA:24   AAGAUUGUAACGGGUGUAAGUAUA   1
  |||||=|||||=||||||||||||
targets:4021   UUCUAGCAUUGUCCACAUUCAUAU   4044

2.5 PREDICTED: Oryza sativa Japonica Group putative pentatricopeptide repeat-containing protein At5g43820 (LOC4329106), transcript variant X1, mRNA putative pentatricopeptide repeat-containing protein At5g43820(LOC4329106) coding protein psRNATarget
AK288826.1
ncRNA:24   AAGAUUGUAACGGGUGUAAGUAUA   1
  |||||=|||||||||||||=||||
targets:1372   UUCUAGCAUUGCCCACAUUUAUAU   1395

2.5 Oryza sativa Japonica Group cDNA, clone: J090073I23, full insert sequence NA coding protein psRNATarget
XM_015787709.1
ncRNA:24   AAGAUUGUAACGGGUGUAAGUAUA   1
  |||||=|||||||||||||||||*
targets:537   UUCUAGCAUUGCCCACAUUCAUAC   560

2.0 PREDICTED: Oryza sativa Japonica Group uncharacterized LOC4340081 (LOC4340081), transcript variant X1, mRNA uncharacterized LOC4340081(Os06g0142000) coding protein psRNATarget
XM_015787712.1
ncRNA:24   AAGAUUGUAACGGGUGUAAGUAUA   1
  |||||=|||||||||||||||||*
targets:537   UUCUAGCAUUGCCCACAUUCAUAC   560

2.0 PREDICTED: Oryza sativa Japonica Group uncharacterized LOC4340081 (LOC4340081), transcript variant X4, mRNA uncharacterized LOC4340081(Os06g0142000) coding protein psRNATarget
AK243435.1
ncRNA:24   AAGAUUGUAACGGGUGUAAGUAUA   1
  ||=|||=||||=||||||||||||
targets:1709   UUUUAAUAUUGUCCACAUUCAUAU   1732

2.5 Oryza sativa Japonica Group cDNA, clone: J100068A12, full insert sequence NA coding protein psRNATarget
XM_015755175.1
ncRNA:24   AAGAUUGUAACGGGUGUAAGUAUA   1
  ||=|||=||||=||||||||||||
targets:1719   UUUUAAUAUUGUCCACAUUCAUAU   1742

2.5 PREDICTED: Oryza sativa Japonica Group cytochrome P450 76M5-like (LOC4347207), mRNA cytochrome P450 76M5-like(LOC4347207) coding protein psRNATarget
AK070816.1
ncRNA:24   AAGAUUGUAACGGGUGUAAGUAUA   1
  |||||*||||||||||||||||||
targets:1277   UUCUAUCAUUGCCCACAUUCAUAU   1300

1.0 Oryza sativa Japonica Group cDNA clone:J023066M01, full insert sequence NA coding protein psRNATarget
CT832958.1
ncRNA:24   AAGAUUGUAACGGGUGUAAGUAUA   1
  |||||==||||||||||||||||*
targets:836   UUCUAGUAUUGCCCACAUUCAUAC   859

3.0 Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRA109F21, full insert sequence NA coding protein psRNATarget
AK065332.1
ncRNA:24   AAGAUUGUAACGGGUGUAAGUAUA   1
  |||||==||||||||||||||||*
targets:839   UUCUAGUAUUGCCCACAUUCAUAC   862

3.0 Oryza sativa Japonica Group cDNA clone:J013000K10, full insert sequence NA coding protein psRNATarget
AK100772.1
ncRNA:24   AAGAUUGUAACGGGUGUAAGUAUA   1
  |||||=||||*|||||||||||||
targets:605   UUCUAGCAUUUCCCACAUUCAUAU   628

2.0 Oryza sativa Japonica Group cDNA clone:J023120A05, full insert sequence NA coding protein psRNATarget
XM_015788300.1
ncRNA:24   AAGAUUGUAACGGGUGUAAGUAUA   1
  |||||=||||*|||||||||||||
targets:603   UUCUAGCAUUUCCCACAUUCAUAU   626

2.0 PREDICTED: Oryza sativa Japonica Group GPI-anchored protein LORELEI (LOC4340837), transcript variant X2, mRNA GPI-anchored protein LORELEI(LOC4340837) coding protein psRNATarget
XM_015788302.1
ncRNA:24   AAGAUUGUAACGGGUGUAAGUAUA   1
  |||||=||||*|||||||||||||
targets:612   UUCUAGCAUUUCCCACAUUCAUAU   635

2.0 PREDICTED: Oryza sativa Japonica Group GPI-anchored protein LORELEI (LOC4340837), transcript variant X3, mRNA GPI-anchored protein LORELEI(LOC4340837) coding protein psRNATarget
XM_015788299.1
ncRNA:24   AAGAUUGUAACGGGUGUAAGUAUA   1
  |||||=||||*|||||||||||||
targets:634   UUCUAGCAUUUCCCACAUUCAUAU   657

2.0 PREDICTED: Oryza sativa Japonica Group GPI-anchored protein LORELEI (LOC4340837), transcript variant X1, mRNA GPI-anchored protein LORELEI(LOC4340837) coding protein psRNATarget
CT837490.1
ncRNA:24   AAGAUUGUAACGGGUGUAAGUAUA   1
  |||||=||||*|||||||||||||
targets:842   UUCUAGCAUUUCCCACAUUCAUAU   865

2.0 Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRA109F07, full insert sequence NA coding protein psRNATarget
XM_015795868.1
ncRNA:24   AAGAUUGUAACGGGUGUAAGUAUA   1
  |||||=||||||||||||||||*|
targets:1166   UUCUAGCAUUGCCCACAUUCAUUU   1189

2.5 PREDICTED: Oryza sativa Japonica Group uncharacterized LOC107277671 (LOC107277671), mRNA uncharacterized LOC107277671(LOC107277671) coding protein psRNATarget
AK071625.1
ncRNA:24   AAGAUUGUAACGGGUGUAAGUAUA   1
  |||||=||||*|||||||||||||
targets:1310   UUCUAGCAUUACCCACAUUCAUAU   1333

2.0 Oryza sativa Japonica Group cDNA clone:J023106F16, full insert sequence NA coding protein psRNATarget
AK066283.1
ncRNA:24   AAGAUUGUAACGGGUGUAAGUAUA   1
  |||||=||||||||||||||||*|
targets:953   UUCUAGCAUUGCCCACAUUCAUUU   976

2.5 Oryza sativa Japonica Group cDNA clone:J013063D15, full insert sequence NA coding protein psRNATarget
AK100993.1
ncRNA:24   AAGAUUGUAACGGGUGUAAGUAUA   1
  ||*||||||||||||||||=||||
targets:1168   UUAUAACAUUGCCCACAUUUAUAU   1191

1.5 Oryza sativa Japonica Group cDNA clone:J023146F15, full insert sequence NA coding protein psRNATarget
AK287994.1
ncRNA:24   AAGAUUGUAACGGGUGUAAGUAUA   1
  |||||=||||*|||||||||||||
targets:1470   UUCUAGCAUUUCCCACAUUCAUAU   1493

2.0 Oryza sativa Japonica Group cDNA, clone: J075099E21, full insert sequence NA coding protein psRNATarget
XM_015782137.1
ncRNA:24   AAGAUUGUAACGGGUGUAAGUAUA   1
  |||||=||||*|||||||||||||
targets:1519   UUCUAGCAUUUCCCACAUUCAUAU   1542

2.0 PREDICTED: Oryza sativa Japonica Group uncharacterized LOC4339294 (LOC4339294), mRNA uncharacterized LOC4339294(LOC4339294) coding protein psRNATarget
AK106586.1
ncRNA:24   AAGAUUGUAACGGGUGUAAGUAUA   1
  |||||=||||*|||||||||||||
targets:619   UUCUAGCAUUUCCCACAUUCAUAU   642

2.0 Oryza sativa Japonica Group cDNA clone:002-111-E12, full insert sequence NA coding protein psRNATarget
XM_015760082.1
ncRNA:24   AAGAUUGUAACGGGUGUAAGUAUA   1
  |||||=||||*|||||||||||||
targets:1500   UUCUAGCAUUUCCCACAUUCAUAU   1523

2.0 PREDICTED: Oryza sativa Japonica Group putative protease Do-like 14 (LOC4350193), mRNA putative protease Do-like 14(LOC4350193) coding protein psRNATarget
AK099655.1
ncRNA:24   AAGAUUGUAACGGGUGUAAGUAUA   1
  |||||=||||*|||||||||||||
targets:700   UUCUAGCAUUUCCCACAUUCAUAU   723

2.0 Oryza sativa Japonica Group cDNA clone:J013066C07, full insert sequence NA coding protein psRNATarget
XM_015779938.1
ncRNA:24   AAGAUUGUAACGGGUGUAAGUAUA   1
  |||||=||||*|||||||||||||
targets:893   UUCUAGCAUUUCCCACAUUCAUAU   916

2.0 PREDICTED: Oryza sativa Japonica Group small nuclear ribonucleoprotein Sm D1 (LOC4336118), transcript variant X2, mRNA small nuclear ribonucleoprotein Sm D1(LOC4336118) coding protein psRNATarget
XM_015779937.1
ncRNA:24   AAGAUUGUAACGGGUGUAAGUAUA   1
  |||||=||||*|||||||||||||
targets:985   UUCUAGCAUUUCCCACAUUCAUAU   1008

2.0 PREDICTED: Oryza sativa Japonica Group small nuclear ribonucleoprotein Sm D1 (LOC4336118), transcript variant X1, mRNA small nuclear ribonucleoprotein Sm D1(LOC4336118) coding protein psRNATarget
AK119344.1
ncRNA:24   AAGAUUGUAACGGGUGUAAGUAUA   1
  |||||=||||||||||||||||*|
targets:1169   UUCUAGCAUUGCCCACAUUCAUUU   1192

2.5 Oryza sativa Japonica Group cDNA clone:001-131-E01, full insert sequence NA coding protein psRNATarget
XM_015760919.1
ncRNA:24   AAGAUUGUAACGGGUGUAAGUAUA   1
  |||||=||||*|||||||||||||
targets:21   UUCUAGCAUUUCCCACAUUCAUAU   44

2.0 PREDICTED: Oryza sativa Japonica Group uncharacterized LOC4350122 (LOC4350122), mRNA uncharacterized LOC4350122(LOC4350122) coding protein psRNATarget
XM_015781780.1
ncRNA:24   AAGAUUGUAACGGGUGUAAGUAUA   1
  |||||=||||*|||||||||||||
targets:3150   UUCUAGCAUUUCCCACAUUCAUAU   3173

2.0 PREDICTED: Oryza sativa Japonica Group protein ASPARTIC PROTEASE IN GUARD CELL 2 (LOC4337402), mRNA protein ASPARTIC PROTEASE IN GUARD CELL 2(LOC4337402) coding protein psRNATarget
XM_015755177.1
ncRNA:24   AAGAUUGUAACGGGUGUAAGUAUA   1
  |||||*|||||=||||||||||||
targets:1756   UUCUACCAUUGUCCACAUUCAUAU   1779

2.5 PREDICTED: Oryza sativa Japonica Group glutathione S-transferase T3 (LOC4346703), transcript variant X1, mRNA glutathione S-transferase T3(LOC4346703) coding protein psRNATarget
XM_015783728.1
ncRNA:24   AAGAUUGUAACGGGUGUAAGUAUA   1
  |||||=||||*|||||||||||||
targets:2805   UUCUAGCAUUUCCCACAUUCAUAU   2828

2.0 PREDICTED: Oryza sativa Japonica Group uncharacterized LOC9271594 (LOC9271594), transcript variant X1, mRNA uncharacterized LOC9271594(LOC9271594) coding protein psRNATarget
XM_015780917.1
ncRNA:24   AAGAUUGUAACGGGUGUAAGUAUA   1
  |||||=||||*|||||||||||||
targets:4685   UUCUAGCAUUUCCCACAUUCAUAU   4708

2.0 PREDICTED: Oryza sativa Japonica Group DExH-box ATP-dependent RNA helicase DExH7, chloroplastic (LOC9267691), transcript variant X2, mRNA DExH-box ATP-dependent RNA helicase DExH7, chloroplastic(LOC9267691) coding protein psRNATarget
XM_015780918.1
ncRNA:24   AAGAUUGUAACGGGUGUAAGUAUA   1
  |||||=||||*|||||||||||||
targets:4734   UUCUAGCAUUUCCCACAUUCAUAU   4757

2.0 PREDICTED: Oryza sativa Japonica Group DExH-box ATP-dependent RNA helicase DExH7, chloroplastic (LOC9267691), transcript variant X3, mRNA DExH-box ATP-dependent RNA helicase DExH7, chloroplastic(LOC9267691) coding protein psRNATarget
XM_015780916.1
ncRNA:24   AAGAUUGUAACGGGUGUAAGUAUA   1
  |||||=||||*|||||||||||||
targets:4743   UUCUAGCAUUUCCCACAUUCAUAU   4766

2.0 PREDICTED: Oryza sativa Japonica Group DExH-box ATP-dependent RNA helicase DExH7, chloroplastic (LOC9267691), transcript variant X1, mRNA DExH-box ATP-dependent RNA helicase DExH7, chloroplastic(LOC9267691) coding protein psRNATarget
XM_015764832.1
ncRNA:24   AAGAUUGUAACGGGUGUAAGUAUA   1
  |||||=||||*|||||||||||||
targets:1192   UUCUAGCAUUCCCCACAUUCAUAU   1215

2.0 PREDICTED: Oryza sativa Japonica Group probable LRR receptor-like serine/threonine-protein kinase At3g47570 (LOC107276755), transcript variant X2, mRNA probable LRR receptor-like serine/threonine-protein kinase At3g47570(LOC107276755) coding protein psRNATarget
AK288229.1
ncRNA:24   AAGAUUGUAACGGGUGUAAGUAUA   1
  |||||=||||*|||||||||||||
targets:3670   UUCUAGCAUUUCCCACAUUCAUAU   3693

2.0 Oryza sativa Japonica Group cDNA, clone: J090012M05, full insert sequence NA coding protein psRNATarget
AK288786.1
ncRNA:24   AAGAUUGUAACGGGUGUAAGUAUA   1
  **|||||||||||||||||=||||
targets:3670   CCCUAACAUUGCCCACAUUUAUAU   3693

1.5 Oryza sativa Japonica Group cDNA, clone: J090069L01, full insert sequence NA coding protein psRNATarget
XM_015790275.1
ncRNA:24   AAGAUUGUAACGGGUGUAAGUAUA   1
  ||||||||||*||||||||||||*
targets:1719   UUCUAACAUUUCCCACAUUCAUAC   1742

2.0 PREDICTED: Oryza sativa Japonica Group alpha-humulene synthase (LOC9270657), transcript variant X2, mRNA alpha-humulene synthase(LOC9270657) coding protein psRNATarget
XM_015790274.1
ncRNA:24   AAGAUUGUAACGGGUGUAAGUAUA   1
  ||||||||||*||||||||||||*
targets:1968   UUCUAACAUUUCCCACAUUCAUAC   1991

2.0 PREDICTED: Oryza sativa Japonica Group alpha-humulene synthase (LOC9270657), transcript variant X1, mRNA alpha-humulene synthase(LOC9270657) coding protein psRNATarget
JB165024.1
ncRNA:24   AAGAUUGUAACGGGUGUAAGUAUA   1
  ||=||=|||||*||||||||||||
targets:8   UUUUAGCAUUGACCACAUUCAUAU   31

2.5 Sequence 2688 from Patent EP2559767 NA coding protein psRNATarget
HI404563.1
ncRNA:24   AAGAUUGUAACGGGUGUAAGUAUA   1
  ||=||=|||||*||||||||||||
targets:8   UUUUAGCAUUGACCACAUUCAUAU   31

2.5 Sequence 2688 from Patent EP2074227 NA coding protein psRNATarget
LQ236693.1
ncRNA:24   AAGAUUGUAACGGGUGUAAGUAUA   1
  ||=||=|||||*||||||||||||
targets:8   UUUUAGCAUUGACCACAUUCAUAU   31

2.5 Sequence 2688 from Patent EP2985353 NA coding protein psRNATarget
CT837804.1
ncRNA:24   AAGAUUGUAACGGGUGUAAGUAUA   1
  ||=||*|||||||=||||||||||
targets:875   UUUUAUCAUUGCCUACAUUCAUAU   898

2.5 Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRA115N24, full insert sequence NA coding protein psRNATarget
CT837593.1
ncRNA:24   AAGAUUGUAACGGGUGUAAGUAUA   1
  |||||==|||*|||||||||||||
targets:96   UUCUAGUAUUUCCCACAUUCAUAU   119

3.0 Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRA122C23, full insert sequence NA coding protein psRNATarget
XM_015768090.1
ncRNA:24   AAGAUUGUAACGGGUGUAAGUAUA   1
  ||=||=||||*|||||||||||||
targets:1235   UUUUAGCAUUACCCACAUUCAUAU   1258

2.0 PREDICTED: Oryza sativa Japonica Group mediator-associated protein 2 (LOC4326241), transcript variant X2, mRNA mediator-associated protein 2(LOC4326241) coding protein psRNATarget
CT837594.1
ncRNA:24   AAGAUUGUAACGGGUGUAAGUAUA   1
  ||=||=||||*|||||||||||||
targets:1291   UUUUAGCAUUUCCCACAUUCAUAU   1314

2.0 Oryza sativa (indica cultivar-group) cDNA clone:OSIGCSN021M15, full insert sequence NA coding protein psRNATarget
XM_015768116.1
ncRNA:24   AAGAUUGUAACGGGUGUAAGUAUA   1
  ||=||=||||*|||||||||||||
targets:1344   UUUUAGCAUUACCCACAUUCAUAU   1367

2.0 PREDICTED: Oryza sativa Japonica Group mediator-associated protein 2 (LOC4326241), transcript variant X5, mRNA mediator-associated protein 2(LOC4326241) coding protein psRNATarget
AK109758.1
ncRNA:24   AAGAUUGUAACGGGUGUAAGUAUA   1
  ||=||=||||*|||||||||||||
targets:1649   UUUUAGCAUUUCCCACAUUCAUAU   1672

2.0 Oryza sativa Japonica Group cDNA clone:002-146-G06, full insert sequence NA coding protein psRNATarget
XM_015768099.1
ncRNA:24   AAGAUUGUAACGGGUGUAAGUAUA   1
  ||=||=||||*|||||||||||||
targets:2531   UUUUAGCAUUACCCACAUUCAUAU   2554

2.0 PREDICTED: Oryza sativa Japonica Group mediator-associated protein 2 (LOC4326241), transcript variant X3, mRNA mediator-associated protein 2(LOC4326241) coding protein psRNATarget
XM_015768108.1
ncRNA:24   AAGAUUGUAACGGGUGUAAGUAUA   1
  ||=||=||||*|||||||||||||
targets:2688   UUUUAGCAUUACCCACAUUCAUAU   2711

2.0 PREDICTED: Oryza sativa Japonica Group mediator-associated protein 2 (LOC4326241), transcript variant X4, mRNA mediator-associated protein 2(LOC4326241) coding protein psRNATarget
AK288214.1
ncRNA:24   AAGAUUGUAACGGGUGUAAGUAUA   1
  ||=||=||||*|||||||||||||
targets:2615   UUUUAGCAUUUCCCACAUUCAUAU   2638

2.0 Oryza sativa Japonica Group cDNA, clone: J090010G11, full insert sequence NA coding protein psRNATarget
XM_015767758.1
ncRNA:24   AAGAUUGUAACGGGUGUAAGUAUA   1
  |||||==|||*|||||||||||||
targets:3754   UUCUAGUAUUUCCCACAUUCAUAU   3777

3.0 PREDICTED: Oryza sativa Japonica Group transcription factor bHLH68 (LOC4325885), transcript variant X3, mRNA transcription factor bHLH68(LOC4325885) coding protein psRNATarget
AK288568.1
ncRNA:24   AAGAUUGUAACGGGUGUAAGUAUA   1
  ||=||=||||*|||||||||||||
targets:2786   UUUUAGCAUUUCCCACAUUCAUAU   2809

2.0 Oryza sativa Japonica Group cDNA, clone: J090048B06, full insert sequence NA coding protein psRNATarget
XM_015786713.1
ncRNA:24   AAGAUUGUAACGGGUGUAAGUAUA   1
  ||||||=|||*||||||||||||*
targets:648   UUCUAAUAUUCCCCACAUUCAUAG   671

3.0 PREDICTED: Oryza sativa Japonica Group uncharacterized LOC4339970 (LOC4339970), mRNA uncharacterized LOC4339970(LOC4339970) coding protein psRNATarget
AK069041.1
ncRNA:24   AAGAUUGUAACGGGUGUAAGUAUA   1
  *||||*=|||||||||||||||||
targets:2178   AUCUAUUAUUGCCCACAUUCAUAU   2201

2.0 Oryza sativa Japonica Group cDNA clone:J023004J15, full insert sequence NA coding protein psRNATarget
AK240884.1
ncRNA:24   AAGAUUGUAACGGGUGUAAGUAUA   1
  ||=||==|||*|||||||||||||
targets:423   UUUUAGUAUUUCCCACAUUCAUAU   446

3.0 Oryza sativa Japonica Group cDNA, clone: J065028F04, full insert sequence NA coding protein psRNATarget
AK243498.1
ncRNA:24   AAGAUUGUAACGGGUGUAAGUAUA   1
  ||=||==|||*|||||||||||||
targets:1391   UUUUAGUAUUUCCCACAUUCAUAU   1414

3.0 Oryza sativa Japonica Group cDNA, clone: J100074F07, full insert sequence NA coding protein psRNATarget
XM_015758812.1
ncRNA:24   AAGAUUGUAACGGGUGUAAGUAUA   1
  ||=||==|||*|||||||||||||
targets:1384   UUUUAGUAUUUCCCACAUUCAUAU   1407

3.0 PREDICTED: Oryza sativa Japonica Group protein NEN1 (LOC9268899), transcript variant X1, mRNA protein NEN1(LOC9268899) coding protein psRNATarget
XM_015758813.1
ncRNA:24   AAGAUUGUAACGGGUGUAAGUAUA   1
  ||=||==|||*|||||||||||||
targets:1557   UUUUAGUAUUUCCCACAUUCAUAU   1580

3.0 PREDICTED: Oryza sativa Japonica Group protein NEN1 (LOC9268899), transcript variant X2, mRNA protein NEN1(LOC9268899) coding protein psRNATarget
AK106303.1
ncRNA:24   AAGAUUGUAACGGGUGUAAGUAUA   1
  ||=||==|||*|||||||||||||
targets:1552   UUUUAGUAUUUCCCACAUUCAUAU   1575

3.0 Oryza sativa Japonica Group cDNA clone:002-101-C07, full insert sequence NA coding protein psRNATarget
XM_015787270.1
ncRNA:24   AAGAUUGUAACGGGUGUAAGUAUA   1
  ||=||==|||*|||||||||||||
targets:1546   UUUUAGUAUUUCCCACAUUCAUAU   1569

3.0 PREDICTED: Oryza sativa Japonica Group uncharacterized LOC4341670 (LOC4341670), transcript variant X1, mRNA uncharacterized LOC4341670(Os06g0647801) coding protein psRNATarget
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